Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1543 |
Symbol | xynB2 |
ID | 6364358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1833662 |
End bp | 1835257 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680734 |
Product | beta-xylosidase |
Protein accession | YP_001955486 |
Protein GI | 189440405 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000200892 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCA CCGGCACCCT ACGCAAGGCG TTCGCCACCA CACTGGCGGC CGCCATGCTC ATCGGCACGC TGGCCGGCTG CTCGTCGAAC GCCAACTCGA ACGCATCGTC GAACGCCAAG AACTCCAGCG ACTCCAGCCA GACCAGCGCC ACCGAGATCA AGCGCGGCGA ATCGCACGAT CCATCCATCG TCAAGGCCAA CGGCAAGTAC TACATCTTCG GGTCGCATCT CGCCTGGCTG AAAAGCGACG ACCTCGTCAA CTGGACCAGC TTCAAAAACA ACCTGAGCAC CGACTACGAG AAGATCTTCG CCGACATCTG GACCAACTGG TCGAAGCAGT CCGCCAACCC GGACGTCAAG GGCAACATGT GGGCCCCTGA CGTCATCTGG AATGCAACGA TGAAAAAGTG GTGCATGTAC ATGTCGATCA ACGGCGCTAA CTACCGATCG GCAATCGTGC TGCTCACCGC CGACGACATC GAGGGCGACT GGACTTACGT CGGCCCGGTG ACCTACTCCG GCTTCGAAAA GGTCAACGCC TCCAAGACCG ACGTCTGGAA GGTGCTCGGC GAAGGCGCCG ACCTGACGCG GTACACGTCG CAGACCGACA CCGGCATCAA CGCGATCGAC CCGTGCGTCA AGCAGGACGA CAACGGCGAC CTGTGGATGA CGTTCGGCTC ATGGTTCGGC GGCATGTGGA TGTTCAAGCT CGATCCGAAG ACCGGCCTGC GCGACTACAG CACCACGTAC CAGACGGTCA AGAACCAGTC CGACGCCTAC TACGGCATCA AGCTCGGCGG CGGCTTCGGC AACTCCGGCG AAGGCTCGTA CCTGCTGCAT ACCAACGGCC ACTGGTATCT GTTCGCATCC TACGGCAACC TGCAGCAGAC CGGCGGCTAC CAAGTGCGCA TGTTCCGCGC CGACAAGATC ACCGGTCCGT ACATCGATGA AAACGGCAAC GCCGCAGTCA GCGAGCGCGC CATCGGCAAC AACTGGCAGA GCGAGGTCGG CGTGCGTCTC ATGAGCTCGA TCCAGTGGAG CGGCAACGAC AACTCGCACA TCGAAGTCGC GCAGGGCCAC AACTCGGCGT TCGTGGACGA CGACGGCACC ACGTACATCG TGTACCACAG CCGCTTCTCC GACACCGGCG AGATGCACCA GGTACGCGTG CGCGAGCTGC TGCCGACCGA CGACGGCTGG CTGGTCGCCG CGCCGTACGA ATACACCGGC ACCAAGGCCG CCGACACCAA GTACGACGCG AAGAACGTGG CCGGCGACTA CGAGTTCGTG ATCCACGACC AGAGGACCTC GTTCAAGGGC CCGAAGAAGG TCACCGACAA GCACAGCACC GACTACCGCG GTGTCAACAA GCCGGCGAAC ATCACGCTGA CCGAGGACGG CAAGGTGACC GGCGACAAGA CCGGCACGTG GAAGCTCGAC AAGTCCGACG GCACCGGCGA CATGACCATC ACGCTCGACG GGGTGGAGTA CCACGGCGCA TTCGACAGGC TGCCGCGCGA CAAGGACGAC CGCAAGGTCG AGATGACGTT CTCCGTCATC GGCGACAACC TCTGCGCCTG GGCCTCGCAG AAGTAG
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Protein sequence | MTLTGTLRKA FATTLAAAML IGTLAGCSSN ANSNASSNAK NSSDSSQTSA TEIKRGESHD PSIVKANGKY YIFGSHLAWL KSDDLVNWTS FKNNLSTDYE KIFADIWTNW SKQSANPDVK GNMWAPDVIW NATMKKWCMY MSINGANYRS AIVLLTADDI EGDWTYVGPV TYSGFEKVNA SKTDVWKVLG EGADLTRYTS QTDTGINAID PCVKQDDNGD LWMTFGSWFG GMWMFKLDPK TGLRDYSTTY QTVKNQSDAY YGIKLGGGFG NSGEGSYLLH TNGHWYLFAS YGNLQQTGGY QVRMFRADKI TGPYIDENGN AAVSERAIGN NWQSEVGVRL MSSIQWSGND NSHIEVAQGH NSAFVDDDGT TYIVYHSRFS DTGEMHQVRV RELLPTDDGW LVAAPYEYTG TKAADTKYDA KNVAGDYEFV IHDQRTSFKG PKKVTDKHST DYRGVNKPAN ITLTEDGKVT GDKTGTWKLD KSDGTGDMTI TLDGVEYHGA FDRLPRDKDD RKVEMTFSVI GDNLCAWASQ K
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