| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1543 |
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| Symbol | xynB2 |
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| ID | 6364358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1833662 |
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| End bp | 1835257 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680734 |
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| Product | beta-xylosidase |
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| Protein accession | YP_001955486 |
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| Protein GI | 189440405 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000200892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCA CCGGCACCCT ACGCAAGGCG TTCGCCACCA CACTGGCGGC CGCCATGCTC
ATCGGCACGC TGGCCGGCTG CTCGTCGAAC GCCAACTCGA ACGCATCGTC GAACGCCAAG
AACTCCAGCG ACTCCAGCCA GACCAGCGCC ACCGAGATCA AGCGCGGCGA ATCGCACGAT
CCATCCATCG TCAAGGCCAA CGGCAAGTAC TACATCTTCG GGTCGCATCT CGCCTGGCTG
AAAAGCGACG ACCTCGTCAA CTGGACCAGC TTCAAAAACA ACCTGAGCAC CGACTACGAG
AAGATCTTCG CCGACATCTG GACCAACTGG TCGAAGCAGT CCGCCAACCC GGACGTCAAG
GGCAACATGT GGGCCCCTGA CGTCATCTGG AATGCAACGA TGAAAAAGTG GTGCATGTAC
ATGTCGATCA ACGGCGCTAA CTACCGATCG GCAATCGTGC TGCTCACCGC CGACGACATC
GAGGGCGACT GGACTTACGT CGGCCCGGTG ACCTACTCCG GCTTCGAAAA GGTCAACGCC
TCCAAGACCG ACGTCTGGAA GGTGCTCGGC GAAGGCGCCG ACCTGACGCG GTACACGTCG
CAGACCGACA CCGGCATCAA CGCGATCGAC CCGTGCGTCA AGCAGGACGA CAACGGCGAC
CTGTGGATGA CGTTCGGCTC ATGGTTCGGC GGCATGTGGA TGTTCAAGCT CGATCCGAAG
ACCGGCCTGC GCGACTACAG CACCACGTAC CAGACGGTCA AGAACCAGTC CGACGCCTAC
TACGGCATCA AGCTCGGCGG CGGCTTCGGC AACTCCGGCG AAGGCTCGTA CCTGCTGCAT
ACCAACGGCC ACTGGTATCT GTTCGCATCC TACGGCAACC TGCAGCAGAC CGGCGGCTAC
CAAGTGCGCA TGTTCCGCGC CGACAAGATC ACCGGTCCGT ACATCGATGA AAACGGCAAC
GCCGCAGTCA GCGAGCGCGC CATCGGCAAC AACTGGCAGA GCGAGGTCGG CGTGCGTCTC
ATGAGCTCGA TCCAGTGGAG CGGCAACGAC AACTCGCACA TCGAAGTCGC GCAGGGCCAC
AACTCGGCGT TCGTGGACGA CGACGGCACC ACGTACATCG TGTACCACAG CCGCTTCTCC
GACACCGGCG AGATGCACCA GGTACGCGTG CGCGAGCTGC TGCCGACCGA CGACGGCTGG
CTGGTCGCCG CGCCGTACGA ATACACCGGC ACCAAGGCCG CCGACACCAA GTACGACGCG
AAGAACGTGG CCGGCGACTA CGAGTTCGTG ATCCACGACC AGAGGACCTC GTTCAAGGGC
CCGAAGAAGG TCACCGACAA GCACAGCACC GACTACCGCG GTGTCAACAA GCCGGCGAAC
ATCACGCTGA CCGAGGACGG CAAGGTGACC GGCGACAAGA CCGGCACGTG GAAGCTCGAC
AAGTCCGACG GCACCGGCGA CATGACCATC ACGCTCGACG GGGTGGAGTA CCACGGCGCA
TTCGACAGGC TGCCGCGCGA CAAGGACGAC CGCAAGGTCG AGATGACGTT CTCCGTCATC
GGCGACAACC TCTGCGCCTG GGCCTCGCAG AAGTAG
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| Protein sequence | MTLTGTLRKA FATTLAAAML IGTLAGCSSN ANSNASSNAK NSSDSSQTSA TEIKRGESHD
PSIVKANGKY YIFGSHLAWL KSDDLVNWTS FKNNLSTDYE KIFADIWTNW SKQSANPDVK
GNMWAPDVIW NATMKKWCMY MSINGANYRS AIVLLTADDI EGDWTYVGPV TYSGFEKVNA
SKTDVWKVLG EGADLTRYTS QTDTGINAID PCVKQDDNGD LWMTFGSWFG GMWMFKLDPK
TGLRDYSTTY QTVKNQSDAY YGIKLGGGFG NSGEGSYLLH TNGHWYLFAS YGNLQQTGGY
QVRMFRADKI TGPYIDENGN AAVSERAIGN NWQSEVGVRL MSSIQWSGND NSHIEVAQGH
NSAFVDDDGT TYIVYHSRFS DTGEMHQVRV RELLPTDDGW LVAAPYEYTG TKAADTKYDA
KNVAGDYEFV IHDQRTSFKG PKKVTDKHST DYRGVNKPAN ITLTEDGKVT GDKTGTWKLD
KSDGTGDMTI TLDGVEYHGA FDRLPRDKDD RKVEMTFSVI GDNLCAWASQ K
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