Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1402 |
Symbol | |
ID | 6364115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1626420 |
End bp | 1628075 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642680586 |
Product | putative transcriptional regulator |
Protein accession | YP_001955345 |
Protein GI | 189440264 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATGT TGCCGGCCAA AGAAAGTTTG ACGGTTGAGT TCAAGAGTGA GCAGAAGCGC CCTCAATCGC ATGATGAAAT TGTTGACAAC GTAGTGGCTC TAGCCAATAC CGAAGGCGGC ACACTGTATC TCGGTATTGA AGACGATGGC ACTGTGACCG GCGTATGTGA CGAGCATCGC AATATCAATG GACTTGCGGT ACTAATTTTC AATAAGACTG TTCCGCAGCT TCCCGCTCGC GTGGCGCTCT TGTATGAGAA CGAGGTGCCG ATAGTCAGTA TTGAGGTGGA TAACAGTCAG CAAATCGTAT CTACCAGTCA GGGGAAGACA TTGCAGCGCC GGCTGAAAGC AGACGGCTCG CCTGAGGTCG TTCCGCTGTT TGTTTCCCAA TTCATTAGCC GTTTATCTCA GCAACGGTTC TACGATTTCA GCGCGCAACC TGCACCAGAG GCTCGGTTGG ACGATTTGAA TCCAGACTCA CGGAACAAGT TGAGAAGCCA TATTCGCAGT GCCAATGCGC AAAACTCGTT GTTGTCTTTT ACTGATGAGG ATTTCGATCG GGCACTTGAG CTGGTTGTTG ATGGCCCGTA TGGATTGCAG CCATCTGTTG CTGGTCTGCT CACCATTGGT TCGGTTGATG CTATTCATCG ATCGGTTCCA GCCGCATCGG CTGTTTTTCA AGTGATGAAA GGCATGTCTC CAAAGGTCAA TATGGATCCG TTCGTGTTGC CTTTGGTGGA TATGTTTGAT CGTGTAGGCG AGCTGATGGA GCCATGGAAT CCCAGCCACG AAGTCATGAG CGGCTTGATT CGTGTCGATC TGCCAGACTT CGATCGAGGG GCATTCCGTG AGGCAATGAT TAACGCTTTC TGCCATCGCG ATTATGCACG AATGGGTTCG GTGAGGTTCC TGGTTGATGA TGATGGGTTG ACCATAGCCA ACCCCGGAGG ATTCATAGAG GGTGTCTCCG AAGATAACCT GCTTACTGCA CAACCGCGTT CCCGCAATCC GCAGCTTGCC CTGATTCTGA AAGCTGCCGG ATATGTTGAA CGCACCGGAC GAGGCGTGGA TACCATCTAT GCCGGGTCGA TTGCGGCGGG TGGTTCTTTC CCGGATTATT CACAGTCCAG TGCTGAGGAA GTTATCTTGT TCTTGCGCCG TGTGGTACCT GACGAGGCAT TCGTGACCAT GATTGGCGAC GAGGAACGTC GACGTGGGGC TCCATTGCCG GTCTGGTCAC TGATTGTGCT CTCGCTGCTG CGTGAGCATC GTAGGCTTAC CGTGGTCCAA TTGTGCGATT TCTCCCATTT GGAGCATCGA CGCATCGTGT CCGCTGTTGA GAATCTGGTG GAAGCTGGTT TGGTAGAGGG GGTCGGTAGC GGGAGCTCTC GTTCGTATAT GCTGAGTGCC CGAGTGTACA AACGTTCAGA GGGGCTGGCG TCTTACGTGC GCCAGCGTGA CATCGATGCC ACCCGGCGCA GTGGCCTTGT TCTGGAGTTC GCCGAAAAAA ATGATGGTGT CGTCACTACG GCGGATGTCA TGGATTTGTT TGGCCTGAGC TATATCAGTG CATACCGGTT GTTGAAGAAG CTAGAGGATG CGGGCAAGTT GCGCCGCGAG GGGAATGGGC CGTCATCCCG ATACGTGTTG GGATGA
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Protein sequence | MLMLPAKESL TVEFKSEQKR PQSHDEIVDN VVALANTEGG TLYLGIEDDG TVTGVCDEHR NINGLAVLIF NKTVPQLPAR VALLYENEVP IVSIEVDNSQ QIVSTSQGKT LQRRLKADGS PEVVPLFVSQ FISRLSQQRF YDFSAQPAPE ARLDDLNPDS RNKLRSHIRS ANAQNSLLSF TDEDFDRALE LVVDGPYGLQ PSVAGLLTIG SVDAIHRSVP AASAVFQVMK GMSPKVNMDP FVLPLVDMFD RVGELMEPWN PSHEVMSGLI RVDLPDFDRG AFREAMINAF CHRDYARMGS VRFLVDDDGL TIANPGGFIE GVSEDNLLTA QPRSRNPQLA LILKAAGYVE RTGRGVDTIY AGSIAAGGSF PDYSQSSAEE VILFLRRVVP DEAFVTMIGD EERRRGAPLP VWSLIVLSLL REHRRLTVVQ LCDFSHLEHR RIVSAVENLV EAGLVEGVGS GSSRSYMLSA RVYKRSEGLA SYVRQRDIDA TRRSGLVLEF AEKNDGVVTT ADVMDLFGLS YISAYRLLKK LEDAGKLRRE GNGPSSRYVL G
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