| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1286 |
|---|
| Symbol | |
|---|
| ID | 6363488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1484403 |
|---|
| End bp | 1485686 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642680468 |
|---|
| Product | putative AAA+ superfamily ATPase |
|---|
| Protein accession | YP_001955229 |
|---|
| Protein GI | 189440148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGG AGAGCTCGGA GATTCAACGT GGCGAGTACC TTCCTCGAGT GGCTGATGGG
TTGCTGACTC AGGCATTGCA GTCTTCTGGT GCCGTTCAGA TTAAAGGTCC AAAATGGTGT
GGCAAGACTG CAACGGCAGA AAGGCAGTCG GCGAGTCAGG TCTTCATGCA GGACCCGGAT
CGCAGTGCTA CGCTGTTGGC CTTGGCTGAT ACAAAGCCTT CTCTCATCCT GCGAGGTGAG
GAGCCGAGAC TCATTGATGA ATGGCAGATG GCCCCGCAAT TGTGGGACGC GGTGCGTTTC
GCCATTGATC GAGGGCGCGG TCGTGGCCGA TTCATCCTAA CTGGATCGGC GACTCCTCAA
CAGGAACCAG CTCATTCCGG AGTGGGAAGA ATTGCCCGAT TAACCATGCG TACCATGTCC
TTATTTGAAT CGCAGGAATC GGCGGGCGTT GTTTCGTTGG GAGAGTTGTT CGATGGCAAC
CATGATGTTT CGGGTTTCTC CGATTTCGAT ATTGAAAACA CCGCGTTTGC GCTATGCCGC
GGTGGCTGGC CTGAAGCAGT AGTCGAATCT CGAGTAAATG TTGCCTTGCG CATGGCCGCG
GATTATGTCG AAGAACTACT TGATTCTGAC ATCAATCGTA TGGATGGCAT AAAGCGCAAT
AAAACTTGGA TGCGTCTGAT TATGCGCTCG TATGCGCGCA ATATTTCTTC TCAGGCGTCG
CAATCCACTA TCGCGGCGGA TATGCAGGGT GAACCGCCTT CGGAAGGTAC ACTCTCTGAT
TATTTAGATG CATTGTCGCG AGCTTGCGTG ACTGAAGATC TTCCAGCTTG GAACCCTCGT
TTACGTTCTA AGACTGCAGT GAGAACGAGC CCAACCAGAC ACTTCAGCGA CCCGTCGATA
GCTTGTGCGG TACTGCACGC GACCCCGGAG AAACTCCTTA ATGATTTCGA GACCTTTGGC
TTGCTGTTTG AGTCCATGTG TATTCGCGAT CTGCGTGTGT ATGCTGATGC GCTTGGCGGA
GATGTGTTCC ATTATCGGGA TAAGACGGGA TTGGAATCTG ATGCGGTCAT TGGCCTGCAT
GATGGACGAT GGGCTCTCAT TGAGGTCAAG CTCGGAGAAA AGCAGGTTGA TATTGCGGCG
GCCCATTTGA AAAAGTTGGC TGACAGAATT GATCAAGATC ACGAAGGCCG TCCGTCATTC
TTGATGGTGC TGACCGCTAC GGCTGCCGCT TATCGCCGGG ACGATGGGGT ATTGGTAGTG
CCGTTGGCCA CGCTTGCTCC GTGA
|
|---|
| Protein sequence | MAVESSEIQR GEYLPRVADG LLTQALQSSG AVQIKGPKWC GKTATAERQS ASQVFMQDPD
RSATLLALAD TKPSLILRGE EPRLIDEWQM APQLWDAVRF AIDRGRGRGR FILTGSATPQ
QEPAHSGVGR IARLTMRTMS LFESQESAGV VSLGELFDGN HDVSGFSDFD IENTAFALCR
GGWPEAVVES RVNVALRMAA DYVEELLDSD INRMDGIKRN KTWMRLIMRS YARNISSQAS
QSTIAADMQG EPPSEGTLSD YLDALSRACV TEDLPAWNPR LRSKTAVRTS PTRHFSDPSI
ACAVLHATPE KLLNDFETFG LLFESMCIRD LRVYADALGG DVFHYRDKTG LESDAVIGLH
DGRWALIEVK LGEKQVDIAA AHLKKLADRI DQDHEGRPSF LMVLTATAAA YRRDDGVLVV
PLATLAP
|
|---|
| |