| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1200 |
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| Symbol | rho |
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| ID | 6363402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1375492 |
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| End bp | 1377561 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642680376 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001955143 |
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| Protein GI | 189440062 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAATA GCCAGAATCT TGAGGATATG AAGCTGCCTG AGCTCAAAGA GCTCGCTAAA
CAGATGGGCC TGCGCGGCAC GTCGACCATG CGCAAGCCCG AGCTGCTCGC CACCCTGCAG
GCGGCGCGCA ATGGTGGAGA GCCGCCGGCC GGTGTGACCG TGCGCGCCCC CAAGGCCGCC
AAAACCGCCA AGGTCGTCAA GGCTCCGCAG TCCGATGCCG CTGAGGCCAA CACCACAGAC
AATGCTGACG TGGCCACCCA GTCGCCGGCT CCGGCTCCGG CTGCCACGGA ACCGCAGCTC
GATTTGCCGC TTCCCGTGGC CGACGATGCC AAGAAGGACG AGACCGAACC GCGACGCACC
CGTCGTAAGG CCGCCGATGA TGCCGCATCC GAACCGCGTG CGGCCCGCCG TCGTCGCGAT
GACGACCAGC CCGATTTCGC TCGCCGCAAG CCGCGCAAGA AGGCCGATGA GGCCGGCGAT
CTGCTGGCCA CGCTCGATTT GGGAGATGCA GCGCCTACCG AGCGTCGCCG CGAGCGTCAC
GAGGACGTGG AAGTTCCGCT GATTCGCCGA GTCCGTGATG ATGAGGACGA GCAGCCTCGC
CGCCGTCGTC GCACTGCGGA AAACAGCGAA GAAACCGTGC GTGACCTCGA CGATATCCTG
GCCACGCTGC CCACGCAGAA GCACGAGGAA ACGTCCGAAG ACGGCGAGCA GAACGACGAT
CACGAGTTCG TGCGTCGTAA CCGCCGCGAC CGTAGCGATC GCAACGATCG CGATACCCGT
AATGATCGCA GCGATCGCCG TAACCGTCGC ATGCGTGGCC GTGATCGCGA CAACGCCGAT
GATGATCGTC GCTATGATGA TCGCGATAAT CGTAGCGATC GCAATGACCG TGATAGCCGC
CGCGAAGAGC CGCAGGAGGA TCTGGTGCCG GTGGCCGGCA TCGTCGACGT GCTCGACTCC
TACGCTTTTG TGCGCACTTC CGGCTACCTG CCCGGCCCGA ACGACGTGTA CGTTTCCATG
GGCCAGGTCA AGAAGTACGG CCTGCGCAAG GGCGATGCCG TGCATGGTTC GATTCGCGCC
CCGCGTGAAG GCGACCGCCG CAACCAGCGC CAGAAGTTCG TGCCGCTGCA GGCCATCGAT
TCCATCAACG GCCAAAGCGT TGAAGAAGCG CTCAACCGTC CGCAGTTCTC CAAGCTCACG
CCGCTGTACC CGCAGGAGCG TTTGAAGCAG GAGACCGCCC CGAACAAGCT CACCGGCCGT
ATCATGGACA TCGTTTCCCC AATCGGCAAG GGCCAGCGTG GCCTGATTGT CTCCCCGCCG
AAGGCCGGTA AGACCATCAC CCTGCAGAAC ATCGCCAACT CCATCGCCGC CAACAACCCC
GAGGTCCACC TTATGGTGGT GCTCGTGGAC GAGCGACCCG AAGAGGTCAC CGATATGGAG
CGCACGGTCC AGGGCGAGGT CATTTCCTCC ACCTTCGACC GTCCGGCCTC CGATCACACT
ACGGTTGCCG AACTGGCCGT CGAACGCGCC AAGCGTCTTG TGGAGCTCGG CCAGGACGTG
GTCGTACTGC TCGATTCCAT GACCCGACTG GCTCGCGCTT ACAACATCGC AGCCCCTGCC
TCCGGCCGCA TCCTGTCCGG TGGTGTGGAC GCGCAGGCCC TCTACCCGCC GAAGAAGTTC
TTCGGTGCGG CCCGCAACAT CGAAAACGGC GGCTCCCTGA CCATCATCTC ATCTGCGCTG
GTGGAAACCG GCTCCAAGAT GGACGAGGTG ATTTTCGAGG AGTTCAAGGG CACCGGCAAC
ATGGAACTGC GCCTGTCCCG CGAGCTGGCG GACAAGCGAC TGTTCCCGGC CATCGACATC
AACGCTTCCG GCACCCGCCG CGAGGAGCTC ATCACCAACC CGCAGGAACT GCCGATTATC
TACCGTCTGC GTCGACTGCT GGGCGGCATG GAGCCCGAGC AGGCCTACCA GACGCTGGTG
CCGCGCCTCA AGAAGACCGC CACCAACCGC GACTTCCTCG CCGCCATCGT GCAGCAGGCC
AACACCGGCA ACGCGGTCAA CGGCAACTGA
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| Protein sequence | MANSQNLEDM KLPELKELAK QMGLRGTSTM RKPELLATLQ AARNGGEPPA GVTVRAPKAA
KTAKVVKAPQ SDAAEANTTD NADVATQSPA PAPAATEPQL DLPLPVADDA KKDETEPRRT
RRKAADDAAS EPRAARRRRD DDQPDFARRK PRKKADEAGD LLATLDLGDA APTERRRERH
EDVEVPLIRR VRDDEDEQPR RRRRTAENSE ETVRDLDDIL ATLPTQKHEE TSEDGEQNDD
HEFVRRNRRD RSDRNDRDTR NDRSDRRNRR MRGRDRDNAD DDRRYDDRDN RSDRNDRDSR
REEPQEDLVP VAGIVDVLDS YAFVRTSGYL PGPNDVYVSM GQVKKYGLRK GDAVHGSIRA
PREGDRRNQR QKFVPLQAID SINGQSVEEA LNRPQFSKLT PLYPQERLKQ ETAPNKLTGR
IMDIVSPIGK GQRGLIVSPP KAGKTITLQN IANSIAANNP EVHLMVVLVD ERPEEVTDME
RTVQGEVISS TFDRPASDHT TVAELAVERA KRLVELGQDV VVLLDSMTRL ARAYNIAAPA
SGRILSGGVD AQALYPPKKF FGAARNIENG GSLTIISSAL VETGSKMDEV IFEEFKGTGN
MELRLSRELA DKRLFPAIDI NASGTRREEL ITNPQELPII YRLRRLLGGM EPEQAYQTLV
PRLKKTATNR DFLAAIVQQA NTGNAVNGN
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