Gene BLD_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1173 
Symbolorn1 
ID6363992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp1351073 
End bp1351717 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID642680349 
ProductOligoribonuclease 
Protein accessionYP_001955116 
Protein GI189440035 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.376915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC AACACGACAT CACCGTCAGC GGCAAACCCC TCAACCCGCC AAAACCGCCA 
GCCAAACCCC ACATGCTCCT ATGGATCGAC ACCGAAACCA CCGGCCTCGA CCCCAATCAG 
TGCGAACTCC TGGAAGTCGG CATGCAGGTC ACCGACCTGA AAGCCGAAAC CCGAGGCGGC 
AGCCTGCACC TGATCGTCCA CCCCGACAAC GTGCGCAACT GGGCCAACCA CCCCGAAATG 
CTCAAAGCCT ACGAAATGCA CCTCGCCAAC GGGCTCATGC TCGCCTGCGC CGAAGCACCC 
AAGACCGGCT ACGACTACAA GCACACCGCG CTCAACATCC ACGAATTCCT CAACGACCAA 
CTCAGCCAAT ACACACTCCA CCCCGCAGGA ACCAACGTGG ACTTCGACCT GCGCCAGCTC 
GACGTGCACC TCAGCCGCCA CCTCGAACAC CCCATCACCC AAGGACTCCA CCACCGAAAA 
CTCGACCTCA CCAGCTTCCG CCTCGCCGAC CAAGCCATCG GCGGCAACCC CTACCAAAAC 
CACGCAGGCA CCCACCGAGT CCAGGACTGC ATCCGTCGGG ACATCAACGA CTACACCGCC 
TACCTCGACA TCATCCGAAC CGGCACCCAA GGAGACAGGC AATGA
 
Protein sequence
MNTQHDITVS GKPLNPPKPP AKPHMLLWID TETTGLDPNQ CELLEVGMQV TDLKAETRGG 
SLHLIVHPDN VRNWANHPEM LKAYEMHLAN GLMLACAEAP KTGYDYKHTA LNIHEFLNDQ 
LSQYTLHPAG TNVDFDLRQL DVHLSRHLEH PITQGLHHRK LDLTSFRLAD QAIGGNPYQN 
HAGTHRVQDC IRRDINDYTA YLDIIRTGTQ GDRQ