Gene BLD_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1131 
SymbolxerC4 
ID6364647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand+ 
Start bp1321495 
End bp1322166 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID642680307 
ProductIntegrase 
Protein accessionYP_001955075 
Protein GI189439994 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.127877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGGCG ACGACCTGCT CGCCCACTTC GCCGCGAAGG ACTGGAAACC GGAGACACGC 
AAGGGCGCGA AGAACGCCTG CGTCAGCTAT TTCCGATGGC TCAAAGCGTC CGGCCGCAGC 
GAGGCCGATC CGAGCGAGTT CCTGCCCACC GTCAAGCGTC CCGAGCCGCA TCCCCGCCCA 
TGCCCGGACG TGGTGATACT CGCCGCGCTG CGCAAGGCCA CGGACGGCGA ACGGCTCATG 
CTGCGCCTCG GTGCCGAATG CGGTTTGAGG CGCTTCGAGA TCGCGAAGGT GCACAGCCGC 
GATGTGATGC GCGACCTCGT GGGCTGGAGC CTCGTGGTCG TGGGCAAGGG CGACAAGCAG 
CGCATCGTGC CCATCGGCGA CGACCTCGCC CTGCTGATCC GATCCGCCAA CGGCTATCTG 
TTCCCCGGCC GATGGAGCGG CCACGTCGAA TCATCCTACG TCGGCCGACA CCTGAGCGAC 
CTCTTGGGCG ACGGATGGAC GGCGCACAGC CTGCGCCACA GGTACGCGAC AACGACCTAC 
GCCGCCACAC GAGACCTGCT GCTCGTCTCC AAGCTCCTAG GCCACGCCTC GGTCGAGACC 
ACGCAGCGGT ACATCGCCAT GCCCGACGAC CGCCTGCGCG CCGCAGTGGA AGCCACGCGC 
CTCGCCGCAT GA
 
Protein sequence
MEGDDLLAHF AAKDWKPETR KGAKNACVSY FRWLKASGRS EADPSEFLPT VKRPEPHPRP 
CPDVVILAAL RKATDGERLM LRLGAECGLR RFEIAKVHSR DVMRDLVGWS LVVVGKGDKQ 
RIVPIGDDLA LLIRSANGYL FPGRWSGHVE SSYVGRHLSD LLGDGWTAHS LRHRYATTTY 
AATRDLLLVS KLLGHASVET TQRYIAMPDD RLRAAVEATR LAA