| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1023 |
|---|
| Symbol | lepB2 |
|---|
| ID | 6362662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1206003 |
|---|
| End bp | 1206860 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642680191 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_001954967 |
|---|
| Protein GI | 189439886 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.114866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG ATCAGGATAA CGGCGAATTC CCGGTTTCCG ACAATCCGGA GAGCAACCAG
ACCTCGTATG ATGACGAGGC CGATGCCCGC GATTCCCGCA CGTTCCAAGT CGCTGACCAC
GGCATCGCCC TGTCCCCGGT TCCCCCGGCA CCGGCGCGCC CGGCGCACGC CGCTTCTTCC
GCTGGCGCGG GTGCAGCCGC TGGCGCGAAT GCCGCGGCAG CATCATCGTC AGATGATGAC
CACTTCACCC TACGCGACTT TTTCCTGTGG TGCGGGGTTC CCGTGCTTAT CGTGCTGCTG
ATTCGCATTT TCGCCGTCGG CTTTTACGAG ATTCCTTCGC GCTCGATGAT GGACACCACG
GTGCCCGGCG ATCGCGTGGT GACCAGCAAG CTCACCCCCA AGATCTTCGA TCTGCAGCGC
GGCGACGTCG TGGTATTCAA AGATCCCAAC AACTGGTTGA ACGAGGAGCA GAGCAGTGCT
CCCGGTGGCG GGTATCTCAT CAAGCGACTG ATCGGCCTGC CCGGTGACGT GGTCGAATGC
AAGGGCGCGG GCCAGCCGGT GACCATCAAC GGCGTGGCCA TCAATGAGAC CTCCTACATT
CGCCCCGGCG TGGACCCGAG CGCCTTCCCG TTCTCGGTAA CCGTGACCGA GGGCCGCGTG
TTCGTCATGG GCGACAATCG CGCCAATTCC GCCGACTCCC GCTATCATCA GGATGACGGC
GATCGCGGCT TGGTTCCCAT CTCCGATGTG GTCGGAGTCG GAATCGCGAA ATACTGGCCG
CTTGACCGGC TTGGTGCGAT TGATGACCAC CACGAAGTCT TCAAGGACGT GCCTGACGCT
TCCGGCTCGA ATTCCTGA
|
|---|
| Protein sequence | MQDDQDNGEF PVSDNPESNQ TSYDDEADAR DSRTFQVADH GIALSPVPPA PARPAHAASS
AGAGAAAGAN AAAASSSDDD HFTLRDFFLW CGVPVLIVLL IRIFAVGFYE IPSRSMMDTT
VPGDRVVTSK LTPKIFDLQR GDVVVFKDPN NWLNEEQSSA PGGGYLIKRL IGLPGDVVEC
KGAGQPVTIN GVAINETSYI RPGVDPSAFP FSVTVTEGRV FVMGDNRANS ADSRYHQDDG
DRGLVPISDV VGVGIAKYWP LDRLGAIDDH HEVFKDVPDA SGSNS
|
|---|
| |