| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0895 |
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| Symbol | abfA1 |
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| ID | 6362878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1027862 |
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| End bp | 1030060 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680063 |
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| Product | alpha-L-arabinofuranosidase |
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| Protein accession | YP_001954839 |
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| Protein GI | 189439758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCTTCG AGGACATCAA CCATGGTGCG GATGGCGGGC TGAACGCCAA CATGGTGAAC
AACTACAGTT TTGACGGCGT CTATCTCGAC CATCACACGT GGCGTATGGC CGGCGCCGAA
CGATGGCGTA CGCAGGCCGA TTCCCTGCGT TTCTGGGATT TCATCAACTG TTCCGCCGCC
AGCCTCGGCA GTGAGATACG CGGGATTCAC GGTCAGCGGG TGACCACCGA CTGCCCCGCC
CCGCCAATTC ACGCACATAG CCGATACGCT CGCATCACGT CCGATGTTCC TTCCGAAACC
GGCCCTGCAT ATCTGGAAAA CCTCGGCTAT AACGGAGGCG GCGACAACGG GGGCGAGCCC
GCGTTCTCCA TCGTCGCCGA CCACACCTAT TCCGTCAGTC TCGCGGTACG TCCGGTTCAT
GGGCGGGCCG AGCTGTCCGT CGGCGTGGTC GATAGGTACG GTCTGCCGCT CACCAGCACC
ACTCGATTGT CGTATATCGT GGACGCAGAT CCGCTTGACG ATACGGAAGA GACCGGTCTG
AGGCAGGACG ATGGTGCCAA TGCGCAGGAT TCCGGCGTTT CGATCAGTCC GGATTCGTCG
GATGGTGCCA TCGCCATCGG CCGTGACGGC TGGTACCGGT TCAACGCCGA CGTAACCGGC
CTGAACACCG ATTACGGCAA GCTGCGTATC ACCATTGACG CCGGCGAACG CACCACGTTC
GATCTGGATC TGGTGCAGTT CATGGATGCG GACTATTGGG GCGCGGGCGA CCCGAAATGG
CGTTACGGCA AGCTGCGCCG CGATTTGGTG GAGACCATTC AGGCGTTGCA TCCAGCGTTT
CTGCGATTCC CCGGCGGCTG CATCGTCGAA GGTGTGACGC CCGGCAATGA ATATCGCTGG
AAGGATACCG TCGGCTCCCT GGCCGCGCGA CGCCAACAGT ATTCGATGTG GTCGTTCAAG
ATGCCGGATG GTTCCAGCTA TTCGCAGAGC TATCAGATCG GCTTCTACGA GTATTTCTGC
CTGTGCGAGG ACCTCAAGGC CAAGCCGCTG CCCACTCTGT TCGCCGGCAT CGCATGCCAG
TCGCCCGGCC GAGATCCGCG CCACATGGAT ATCAATTCGG CCACCTTCCG CAACAATGTG
ATTCAGGACT ACCTGGACCT CATCGAATTC GCGAATGGCG ATCCGGAGTC CAGCTCGTGG
GCCGCGGTCC GGCGTGATAT GGGCCATCCT GAGCCGTTCG GCTTGGACAT GATCGGCGTG
GGCAACGAAA ACTTCGGGGC TGACTACGTG GCCAAGTTTG ACATGATCAG CGAGGCCATT
CATGAACGAT ACCCGGATAT GCTGTGTGTG ATGAGCGCCG GACTGTTCCC CTTCCAGCCG
GCGATGAAGC GCAGCTGGGA CCATGCGCGA GCGTTGGCCG CAACCGATTC CGGGGCACAT
GATTCCGCCA CCGGTGACGC GATTATCGTC GACGAGCATT CCTACCACTC CCCCGAATGG
TTTGCATCCC AGGCGTCACG ATTCGACGCT TACCCGCGTT GTGGCGCCGG CGTCTATTTC
GGCGAATATT CAGCCAACGG CTATTTTGCC GGCCAACCAC AGACCGAACA AGGCGCGAAC
ACGTGGAAGT CGGCACTCGG CGAGGCCGCG TTCCTGACCG GCTGCGAGCG CAATTCCGAC
GTGGTGCGCA TGACCTCCTA TGCGCCGCTG CTCGCGCATA TTCCGGCTAA GGGGTGGGCG
CAGAATCTTA TCGAATTCAA TCCGGCGCAT GTGAACCCCA CGGTGAATTA TGAGGTGGAG
CGGCTGTTTT CCACGCATCT GGGCGACACG ACGTATGCCG TGTCCATCGA GCAGACCGCG
TCACGCCCCG CCAAACATCT GTATGTCAGC GCCACCGGGC ATGACAGGGA TGACGCCTGC
CGTTACATCA AAATCGTCAA TATCTCCGAT TCCCCGGTGG ATGTGACGTT GGAAATCGCG
CGCGGACTGG CCGGGCTGGG CGCCTCGCCA TCGCGACCGG TGCGTTTGGA GGTGACGACG
TTAAGCGCCA ATCCGACGGC GAAGACCACT ATCGGATACC GCGGCGAGGC TTCGGGGGCG
ATTGTGCCGG AACGTCGGGC TTACACATTG CCGTCGCCGT CTTCATTGCT GGCGATGAAG
ATCAAGCCGT ACAGCGTCAC GCTGGTGGTT TCGCGCTGA
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| Protein sequence | MFFEDINHGA DGGLNANMVN NYSFDGVYLD HHTWRMAGAE RWRTQADSLR FWDFINCSAA
SLGSEIRGIH GQRVTTDCPA PPIHAHSRYA RITSDVPSET GPAYLENLGY NGGGDNGGEP
AFSIVADHTY SVSLAVRPVH GRAELSVGVV DRYGLPLTST TRLSYIVDAD PLDDTEETGL
RQDDGANAQD SGVSISPDSS DGAIAIGRDG WYRFNADVTG LNTDYGKLRI TIDAGERTTF
DLDLVQFMDA DYWGAGDPKW RYGKLRRDLV ETIQALHPAF LRFPGGCIVE GVTPGNEYRW
KDTVGSLAAR RQQYSMWSFK MPDGSSYSQS YQIGFYEYFC LCEDLKAKPL PTLFAGIACQ
SPGRDPRHMD INSATFRNNV IQDYLDLIEF ANGDPESSSW AAVRRDMGHP EPFGLDMIGV
GNENFGADYV AKFDMISEAI HERYPDMLCV MSAGLFPFQP AMKRSWDHAR ALAATDSGAH
DSATGDAIIV DEHSYHSPEW FASQASRFDA YPRCGAGVYF GEYSANGYFA GQPQTEQGAN
TWKSALGEAA FLTGCERNSD VVRMTSYAPL LAHIPAKGWA QNLIEFNPAH VNPTVNYEVE
RLFSTHLGDT TYAVSIEQTA SRPAKHLYVS ATGHDRDDAC RYIKIVNISD SPVDVTLEIA
RGLAGLGASP SRPVRLEVTT LSANPTAKTT IGYRGEASGA IVPERRAYTL PSPSSLLAMK
IKPYSVTLVV SR
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