Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0893 |
Symbol | |
ID | 6363219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1025621 |
End bp | 1026697 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642680061 |
Product | putative transcriptional regulator |
Protein accession | YP_001954837 |
Protein GI | 189439756 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.472007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAACA TGGCTGCATC CGTCTCTGCC GATGCCGGTA ATGTCCCCGC CGGCAGCATC ACCAACACCG GCACCAACAA CACCTTCACC AGCACCACCG AATCGTCGCT TGCCACCCTG CTGTCCAACC AATGCCCGTT CGTTATCAAG GCCACCATTT TCGAGGGCAA TGGCAAAAAC GCCATTCGCG AACGTCACAC ATTCACCGGC TCGGTGCTGC GCCAGCTCGA CCAAGCCAGC GCCCTGCTGA ACGGCATCAA CGAATCCGGC CAATACCCGG CCATAGCCCT GCGCGAAGCA TTGGTCAACG CACTGGAACA TCGCGATTAC ACGTACTCCG GCCCCACACT GATCAATATC TTCGATTCCC GCTTGGAAAT CGTGTCGCTC GGCGGCCTGA CCGATGGTTT GGAAATCAAC GATCTACTCA ACGGCGTATG CCAGCCACGC ACCCCGCGTT TGGCTGAATT GTTCGCCGAT TTGGGCCTCT GCGAGAACTG CGGTACCGGC ATTCAACGCA TTATGGACGC CTACGCGCAG AGCGCGGTCA GTCCGCAACT GCGCGTGGGC CCCACTTCGG TGGCAATGGT ACTGCCTATC CCTGTATCGG CCGAGGCCGC GTCCTCGCAT CGGACCGATG CCGATGCTTC CGCCGCGCCC AGCACCACTG ACGAAGCACA GCATGCCAAA ATGTACTCAT TCCCCACGAT TCAGCGCATG ACGGATAACG CCGCAGATGC TTTGGCCGGC GCACGCATCA TCGGCTGCGC GCCACTGCAG ACGCTGATTC TCGGCAGTGG ATTCGGCGAG CGCCCGGACG GTGACGATCA GGCCAGTACC CGCCCGCTTG ATACGGCGAC GCTGGAACCG TCGCCTCAAA CGTTGGAACA GTTCACGCTC AATTTCCTCG CGTTCCGCGG TGTGAAGCTC AGCCGTAAAA CCATGCAGAA AGCGCTTGGC CTGAACAAGG ATCAGATGAC GCAGCTCTTG GACCAGCTGG AGTTGAGCGG CAAGATCGAA CGTCATACGC ACGCCAAGTC CACTACGTAT TCGCTGGCAC ATGCCTCAGG ACGGTAG
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Protein sequence | MTNMAASVSA DAGNVPAGSI TNTGTNNTFT STTESSLATL LSNQCPFVIK ATIFEGNGKN AIRERHTFTG SVLRQLDQAS ALLNGINESG QYPAIALREA LVNALEHRDY TYSGPTLINI FDSRLEIVSL GGLTDGLEIN DLLNGVCQPR TPRLAELFAD LGLCENCGTG IQRIMDAYAQ SAVSPQLRVG PTSVAMVLPI PVSAEAASSH RTDADASAAP STTDEAQHAK MYSFPTIQRM TDNAADALAG ARIIGCAPLQ TLILGSGFGE RPDGDDQAST RPLDTATLEP SPQTLEQFTL NFLAFRGVKL SRKTMQKALG LNKDQMTQLL DQLELSGKIE RHTHAKSTTY SLAHASGR
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