| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0873 |
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| Symbol | ssnA |
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| ID | 6362845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1001005 |
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| End bp | 1002378 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680040 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001954817 |
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| Protein GI | 189439736 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.291965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA ACACCTGGCC GACCGTCGAT ACCGAGCTTA TCGATGATGT GACACTGTAT
TCCGCCAAAC TCATCATCCC CGTGACGGGC CCCGTCATCA TCGATGGCGC AGTTGCCATA
CATGGCGACC GCGTGGTTCA TGTAGGTAAA CGCCGCTGGG TGCTGAAGGC GCTGAAGCAG
GAAATGACGG CTCACGGCAC CATCCATGAA CGGCATTGGG ATGGGGTGCT CACCCCCGGA
TTGATCAACG CGCACACTCA TCTGCAGTAC AGCGGCATGG TGCAGGTCGG GCAAGGCACC
TACGATCGGT TCCGCGCCTG GGAACTGGCA TTCAACGAGG TGTACGCCGA GGCGCAGAAG
ACCCAGCCAT GGAAGCAGTG GGCCGAGGAC GGCGCTCGCC AGATGGTCGA ATCGGGAACG
ACGGCCGCCG CAGACATCGT CACCGATTTG GACGCCGCCG GCGCGCTGGC TTCGCAGGGC
ATGCACGGCA TCGCTTATTG GGAGGTAATG GGCTGGCACA ACGCCGAATG GATGGAAAAG
GGCCGCACTG AGCTCATCCG GCAGTTGCGC CGGATGAACG AGGAGCAGCT GCCAAACCTC
GGCATCAGCC CGCATGCTCC GTATACGCTG GAGTCCGAAC CGTTCGTTGA TCTTCCAGAC
ATTGCTCGTC AGCTGAACAT GCGACTGCAT ATCCATCTGG CGGAGACCCC GCTCGAGGCC
GGCACTTATC CGCCGGTGCT CACCACTTAT TCGGCGGCCG ACTGGAGTGA CCACGATTGG
GAAAGCTACC GGCAGCTCAA GGAAGTGGGC AAAGGCGCCT CCGCCATCCA GTTCGTCGAT
CAGCTTGGCT CGCTTGGACC GGATGTGCAC ATTGCACACG GCGTGTGGGC CAATGGCGAG
GATCGGCGTA TTCTACGTCA GCGCGGCGTG GGCGTGGCCT TGTGCCCCCG ATCGAATCGC
ATTACCAACA CCGGCAAAGA TGCACCGGTG CGCGAATACC TCGAGGAAGG CAATCTGGTA
AGCGTGGGCA CCGATTCGCT CTCCAGCACG CCGACCCTCG ATCTGCTTGA TGATGTGTCG
ATGCTTTACG ACCTGGCCCG CGAACAAGGC TATGCCAGCG ACGATCTGAC ACATCGCCTG
ATTCGTATGA TGACGCTGGG CGGCGCCGCC TCCATGGGCA TGCACGTGGG CCGCAACCGC
ATTGGACAAA TTAACGCGGG CGCATTGGCT GATTTCGCGT TCTTCGACAT CCCCGTCGAC
ACATCATCTC CGGCCGGCAT CGAAGAAACG CTGGAAACAC TGGTGAGGCA CGGCGCAGGC
ACGAACCGAG CCACGGTGAT ATCCGGGCGC GAAGCCTACA ACAACGCCTG GTGA
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| Protein sequence | MTDNTWPTVD TELIDDVTLY SAKLIIPVTG PVIIDGAVAI HGDRVVHVGK RRWVLKALKQ
EMTAHGTIHE RHWDGVLTPG LINAHTHLQY SGMVQVGQGT YDRFRAWELA FNEVYAEAQK
TQPWKQWAED GARQMVESGT TAAADIVTDL DAAGALASQG MHGIAYWEVM GWHNAEWMEK
GRTELIRQLR RMNEEQLPNL GISPHAPYTL ESEPFVDLPD IARQLNMRLH IHLAETPLEA
GTYPPVLTTY SAADWSDHDW ESYRQLKEVG KGASAIQFVD QLGSLGPDVH IAHGVWANGE
DRRILRQRGV GVALCPRSNR ITNTGKDAPV REYLEEGNLV SVGTDSLSST PTLDLLDDVS
MLYDLAREQG YASDDLTHRL IRMMTLGGAA SMGMHVGRNR IGQINAGALA DFAFFDIPVD
TSSPAGIEET LETLVRHGAG TNRATVISGR EAYNNAW
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