| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0848 |
|---|
| Symbol | |
|---|
| ID | 6362635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 971121 |
|---|
| End bp | 972137 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642680014 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001954792 |
|---|
| Protein GI | 189439711 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2855] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCA TTGGTGTTCT GACTCTGCTG GCCTCGCTGT TCGCCTCCTG GCTCAAGCAG
TTCCCCGGAT TCAGCCTGTT CGGCGCGCTC ATCATCGCGC TGCTCATCGG TATGATCATC
CAGTTCCCGA TCCGCAGTGC CTACGTCGGT TCCAATGATG GCCGCAAGGC AGGCGTCAAG
GACGCCGCTG GCCTGATTTC CAACAAGCTG CTGCGCCTCG GCATCATCCT GCTCGGTTTC
AAGCTCAACC TCGCCGTGCT GTTCACGCAG GGCATCAAGT GTCTGCCGAT CGCCGCTGTG
GTCGTTACGC TGACCATCAT CGTGTGCTAT GCCATCGCCC GCAAACTCGG TGTCGACCCG
ATGCTCGCCA TCCTGACCGC CGGTGGCACC GGCATCTGCG GTGCGGCCGC CGTCATGGGC
CTGGCCGGTT CCATCAAGGT GCCTGAGGAC AAGCAGGACG AGAAGGACAA CGACGTGACC
ATGGCCGTGG CCATCGTAGC CATTATGGGT ACTGTGTTCG CGTTGCTGGA GATCGCGCTC
GGCCCGCTGA CCGGCATGAC CAAGGACCAG CTGGGCATCA CCGCCGGTGC TTCCCTGCAC
GAAATCGCCC ACGCGGTCGC GGGCGGCGAC GCGTTCGGCG CGGTGGACAT CGCCACCATC
ATGAAGCTTT CCCGCGTGCT CATGCTTGTG TTCGCGGCCA TCATCATCGC CATCTGGTGG
GAGAAGAAGC ATTCCGAGGT TCAGAGCACC GGCAAGAAGA CCGTGGCCTT CCCGTGGTTC
ATGCTCGGCT TCATCGGCGC TTCGATTATC GGCACCTTCG TACCGTTCGT CACCTCCATC
ACCCCGCAGC TCGTGGACTT TGCGTACATC GTGCTCGGCA TGGCCATGGC CGCGCTCGGC
ATCAACGTGA ACTTCAAGGC CATCGCTTCC AAGGGCAAGA AGCCGATGCT CGCCAGCTTC
CTGACCTCGA TCCTGCTCAT GTGCTTCGCG GCAGGCGTCG CGGTGCTGTT CTTCTGA
|
|---|
| Protein sequence | MLFIGVLTLL ASLFASWLKQ FPGFSLFGAL IIALLIGMII QFPIRSAYVG SNDGRKAGVK
DAAGLISNKL LRLGIILLGF KLNLAVLFTQ GIKCLPIAAV VVTLTIIVCY AIARKLGVDP
MLAILTAGGT GICGAAAVMG LAGSIKVPED KQDEKDNDVT MAVAIVAIMG TVFALLEIAL
GPLTGMTKDQ LGITAGASLH EIAHAVAGGD AFGAVDIATI MKLSRVLMLV FAAIIIAIWW
EKKHSEVQST GKKTVAFPWF MLGFIGASII GTFVPFVTSI TPQLVDFAYI VLGMAMAALG
INVNFKAIAS KGKKPMLASF LTSILLMCFA AGVAVLFF
|
|---|
| |