Gene BLD_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0839 
Symbol 
ID6362626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp963659 
End bp964291 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID642680005 
Productputative AAA+ superfamily ATPase 
Protein accessionYP_001954783 
Protein GI189439702 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.062546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATGT TGTTTGATGC GGATCTGAGT GTGGAACGGC TGATTCCCGC ACTGTCGATC 
GAGTCCGGAA CTAGGATCAC TCCCGAGGAT ACGCTCGTCA TTTTCGATGA GGTACAGGAG 
GTGCCGAGGG CGATGACTTC GCTGAAGATG TTCAATGAAG CTGCCCCGGA GTATGACGTC 
TTGGCCACTG GATCGGCGCT TGGCATCGCC ATGCATCCTG GGTTTTCATT CCCGGTTGGC 
AAGGTCAGTA GACTCAAGCT GTATCCTATG TCTTTTGTTG AATTCCTGTA TGCGTGCAAA 
CAGTATGCCT TGGCCGAAAT GCTTGAGTCC AAGGATTCTC CGCTAATTAA CGTAATGCAT 
GACAGGGTCA TGACTTGGCT GCGGTATTTC ATGTATACAG GAGGCATGCC GGAGATCGTT 
GAAGCGTTCG CCAGTACTCT GCCGAATCCT GACTTCACGG CGGTTCGTAA ATTGCAGAAT 
AGTCTGGTCT CCGATTATCG TGACGATTTC TCCAAACATG TTGATATGCG TGATAGTCCC 
GCCGTCACCA CGCTTCGTCT CAATCAGGTA TGGGATTCAA TTCCTTCCCA GTTGGCGAAA 
GAGAACAAGA AGTTCGTATA CGGCGTGGTG TGA
 
Protein sequence
MRMLFDADLS VERLIPALSI ESGTRITPED TLVIFDEVQE VPRAMTSLKM FNEAAPEYDV 
LATGSALGIA MHPGFSFPVG KVSRLKLYPM SFVEFLYACK QYALAEMLES KDSPLINVMH 
DRVMTWLRYF MYTGGMPEIV EAFASTLPNP DFTAVRKLQN SLVSDYRDDF SKHVDMRDSP 
AVTTLRLNQV WDSIPSQLAK ENKKFVYGVV