| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0690 |
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| Symbol | rnd |
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| ID | 6364216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 790102 |
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| End bp | 791403 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679850 |
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| Product | ribonuclease D |
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| Protein accession | YP_001954634 |
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| Protein GI | 189439553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00562045 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGACG TCCGTGACAC CGAACCCCGA CTGCTGAAAG AGCCTCGCGG GGGAGTACCC
GATGTCACTT CGACGCTGGA CGGCTATCAT CGTGTCTGCG ATGCGATGGC CGAGGCGACG
GGCTCGCTGG CCGCCGACGC CGAACGGGCG TCCGGCTTCC GCTATGGACA CGAGGATTGG
CTGATTCAGT TCAAACGTGA GGGTGCAGGC ATCGCCTTGC TTGATCCCGT CGCCCTGACC
CGGGCCGGAG CTGATTGGAA TGAATTCAAT GACGCCGTGG GCGACGCCAC GTGGATTCTG
CATGATTCTC TGATGGACTT GCCCGGATTC GCCGAAATCG GGCTCAAACC CAAAGCCCTG
TTCGACACGG AAATAGCGGC GCGATTGCTC GGCCTGCACC GCTTTGGTCT GGCCGCCGTC
ACCGAACACT ACCTCGGCAT CACGCTAGCC AAAGAGCATT CCGCCGCCGA TTGGTCCTAC
CGTCCGCTGC CGCGCGACTG GCGCAACTAT GCGGCGCTCG ACGTGGAGGT GCTTATCGAA
CTTGAAACCA TGATGCGTCG TGACCTGAAA GCCGCAGGCA AGGACGAGTG GGCCGCTGAA
GAGTTTTCTC ACGCTTTGGT TGCGGGCCTT GCCCCGCGCA AACCGCATCC GATTCCTTGG
CTGCGTATCT CGCGCATCAC CCAGCTGAGT CGTGATCCAA GGGGCTTGGC CATCGCCAAA
TCCCTATGGG AGGAGCGCGA CCGACTCGCC CGGCAATACG ATATTGCGCC CAGCCTGTTA
TTGGCCGATT CATCAATCAT CGAGGCGGCG ACCAACAAGC CGCACAATGC TGCCCAATTC
CGCGCGCTCC GATCCCTGAA CGAGCGTGTG CGCATCCATA CCGGCACCGA GCAGGACAAA
ATGTTCGAGC GGTACGCGCC GATTCAGCGT GCGGTCAAAC CGAAGGTCTG GAAGCAGGCC
ATCGATCGAG CCATAGCCCT GAAGCCCACC CAATGGCCTA CCATGCCCGC CCCCGAACAG
GACGAAAACG GTGTGGTGAA CGCGCCCCGA TCCATGCGGC TGTGGCAACA GCGCCATCCG
GAGCGTTATG ACCGTCTGCA ACGGGTGCGG CGTGTGATCA ACCGCATCGC CGAAGACACC
CGCACGCCGG CCGAGATGAT CATCAAGCCA CAGATCCTAC GCAACCTGTG CTGGGTGGAA
GACCCGGTGG AAGTGGACGT CGAGACGTTC CTGGTCGAGC AGGGCGCAAG GAACTGGCAA
GTGAAACTCA TTGCACCGTC CGTAAGTGGC GTTATCATGT AG
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| Protein sequence | MSDVRDTEPR LLKEPRGGVP DVTSTLDGYH RVCDAMAEAT GSLAADAERA SGFRYGHEDW
LIQFKREGAG IALLDPVALT RAGADWNEFN DAVGDATWIL HDSLMDLPGF AEIGLKPKAL
FDTEIAARLL GLHRFGLAAV TEHYLGITLA KEHSAADWSY RPLPRDWRNY AALDVEVLIE
LETMMRRDLK AAGKDEWAAE EFSHALVAGL APRKPHPIPW LRISRITQLS RDPRGLAIAK
SLWEERDRLA RQYDIAPSLL LADSSIIEAA TNKPHNAAQF RALRSLNERV RIHTGTEQDK
MFERYAPIQR AVKPKVWKQA IDRAIALKPT QWPTMPAPEQ DENGVVNAPR SMRLWQQRHP
ERYDRLQRVR RVINRIAEDT RTPAEMIIKP QILRNLCWVE DPVEVDVETF LVEQGARNWQ
VKLIAPSVSG VIM
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