| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0678 |
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| Symbol | smf |
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| ID | 6364015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 775148 |
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| End bp | 776692 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642679836 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_001954622 |
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| Protein GI | 189439541 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTACG CCACGCTCAA AGGCGCGGAA AACGCCGAAT CCCTCTGGCA TGCGTTGGCG
CAATCCCATC CAAGCCAGCC ATCTGAAATC TGCGGCCCGG CGCTGTCACG TATTGACCGC
ATGTTCGTGG ACGGCCTCAC TCGATGGGGC CGCAAGGCGT CGGCGAACGC GATGCGCTCC
TTCCGCAATG CACTGGCCTG CTGGCATAAC CGCATGATGG ACCTGCCCTC GCAAGACATC
ATCCAACTGG CCGACTGGTT CACTATGGAT GGCACGCAAT GGATTATCGG CCCTGGCCAT
CCATGTTGGC CCTCGCAGTT GGCCGACCTG TCCATTCGCT CCGATTGGGC GCCACCGCTG
TGTTTGTGGA TCAAAGGCGA TCCACGCGCA TTGACCAGTT GCGCCAAACC GGTCGGCATC
GTCGGTTCAC GGGACGTGAC CGAATATGGC CGGTATGTGG CACACACCGT AGCCGAACAG
GCAGCCGTTG CCGGGCATCT GGTCGTGTCC GGAGGCGCGA TGGGCACGGA TGCGGCGGCA
CATTGGGGAG CGTTGAATGC GCTGCACGGC AGAATGCCCG CCAATGTGGG CAAAACCGTT
GCCGTATTCG CCGGCGGGCT CAACCATATC GGACCGATGC GTAACCGCAC GCTGTTCGAA
CGCATCGAGG CGCAGGGTGG TGCACTGATC AGTGAACTGT GCCCCGGGAC GATTCCCGAA
GCCCGTCGTT TTCTGCTTCG CAACCGCATT ATCGCGGCCA TGTCTTCCAC ATTGATTGTG
ACGCAAGCCC GGTTGCGTTC CGGAGCGCTC AACACCGCGG GATGGGCATG CGAATTGCTG
CGCGAAGTGT ATGCGGTTCC CGGTGACATC AATCAGCCTT GCAACGCCGG GTGCAATAAG
ATGATCGGCG ACCACCGAGC GATGATTCTG TGTGCCGCCA CATCCACCGA GGATATATGC
CATGAACGGC ATAAGCCCGT TATGGCAGCA TGCCCAGGCA TATCGAAATC CACAGGTCAG
GACTCGTCCG AAAACGAGGA GGCCATGGAA GTGCCGGCAA CGACTCCGTT ATCGCCAGCA
TCCTCGGAAT CATCGGCGTC ACAGGAGTCG TCACAAGATT CAGGTCATTC GAAACGTTCG
AAGACCAAGC ATACTCAGCC TACGCGCACT CAATCCAAGG ATGGGCCGGC GAGCGCAACT
GCCGATTCCG GTAACGACAA AAGCAAGGGT GAAGAGCTTC CCTCGTCGCA TCAGATGCCG
GATCTTCGTG TCAAGCCGAA GCCCGATCCC GAGAAGGAAG CCCAACAACG TATCATTATC
GCCAAGCTGC CGGAAATGGA ACGCACATTA GTGGCATTGA TTCGTGAATG CCGTAAACGA
CATCTCATCG TCACCCCGGA CGCACTATTG CGTGTGGCGC GAGAGACGGT ACCCGACGAG
ATTCCCAATA TCGGCACCAT ACTTGAGCTA CTCGGCGCAT TGGAGCTGAA GGGAGTGATC
GAGCGGGATG CCGGCATACT CAAGCTGAGC AGCCGTGTCG GCTAA
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| Protein sequence | MMYATLKGAE NAESLWHALA QSHPSQPSEI CGPALSRIDR MFVDGLTRWG RKASANAMRS
FRNALACWHN RMMDLPSQDI IQLADWFTMD GTQWIIGPGH PCWPSQLADL SIRSDWAPPL
CLWIKGDPRA LTSCAKPVGI VGSRDVTEYG RYVAHTVAEQ AAVAGHLVVS GGAMGTDAAA
HWGALNALHG RMPANVGKTV AVFAGGLNHI GPMRNRTLFE RIEAQGGALI SELCPGTIPE
ARRFLLRNRI IAAMSSTLIV TQARLRSGAL NTAGWACELL REVYAVPGDI NQPCNAGCNK
MIGDHRAMIL CAATSTEDIC HERHKPVMAA CPGISKSTGQ DSSENEEAME VPATTPLSPA
SSESSASQES SQDSGHSKRS KTKHTQPTRT QSKDGPASAT ADSGNDKSKG EELPSSHQMP
DLRVKPKPDP EKEAQQRIII AKLPEMERTL VALIRECRKR HLIVTPDALL RVARETVPDE
IPNIGTILEL LGALELKGVI ERDAGILKLS SRVG
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