| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0623 |
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| Symbol | rpsD |
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| ID | 6363869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 711359 |
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| End bp | 711985 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679781 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001954567 |
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| Protein GI | 189439486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAACG TTCAGCGTTC TCGCCGTCAG GTGCGTCTGT CTCGCGCCCT CGGCATCGCA
CTGACCCCCA AGGCTCAGCG CATCTTCGAA AAGCGTCCGT ACGCTCCTGG CGAGCACGGC
CGTGACCGCC GCCGCACCGA GTCCGATTAC GCGGTGCGTA TGCGCGAAAA GCAGCGTCTG
CGCGCTCAGT ACGGCATCTC CGAGAAGCAG CTTCGCGCCG CTTACGAGAA GGCCACCCGT
ACTGCCGGCC AGACCGGTAA CGCCATGCTG ACCGACCTCG AGACCCGTCT CGACAACCTG
GTGCTGCGTG CCGGCTTCGC CCGCACCACC GCCCAGGCCC GTCAGTTCGT GGTGCACCGT
CACATCCTCG TTGACGGCAA CATCGTGGAC CGCCCGTCCT ACCGCGTCAA GCCCGGCCAG
ACCATTCAGG TGAAGGCCAA GAGCCAGACC ATGGTTCCGT TCCAGATCGC CGCCGAAGGC
GTGCACCGTG ACGTGCTGCC TGCGGTCCCC GGCTACCTCG ACGTGAACCT GCCGTCCCTG
AAGGCCACCG TGACCCGTAA GCCGGAGGTC GAAGAGATCC CGGTGCAGGT CAACATCCAG
TACGTGGTCG AATTCTACGC CCGCTGA
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| Protein sequence | MTNVQRSRRQ VRLSRALGIA LTPKAQRIFE KRPYAPGEHG RDRRRTESDY AVRMREKQRL
RAQYGISEKQ LRAAYEKATR TAGQTGNAML TDLETRLDNL VLRAGFARTT AQARQFVVHR
HILVDGNIVD RPSYRVKPGQ TIQVKAKSQT MVPFQIAAEG VHRDVLPAVP GYLDVNLPSL
KATVTRKPEV EEIPVQVNIQ YVVEFYAR
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