| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0506 |
|---|
| Symbol | |
|---|
| ID | 6363968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 586531 |
|---|
| End bp | 587163 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642679663 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001954450 |
|---|
| Protein GI | 189439369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCA CCAAGATGAC GCTCAAGGAT CTCGCTGTCT CCTTCCACTT CCCGAAGTTC
TCCACCTCGC GTGACTTCTA CAAGGCGTTC GGCTGCCGAG TGTGCATGTT GCTCAGCTAC
CAGATGATCT CCGTGTACCA ACTCTACATC GTCGAGGATT ACGTGCACCA GACCAAGACC
GAGGCTGCCG GCACCATCGC CACCATGTCC ATCATCACCA TGGTCGTTTC CCTGACCGCT
TCGCTGATCT CCGGCCCGAT CTCCGACAAG ATGCACACGC ACAAGGTACC AGTCATCATC
GCCTCGCTGC TGTTCGCGAT TGGCACCGCG ATGCCGTGGA TCATGCCGAG CGTCACGGGC
ATGTACCTGT ATGCGGGCAT CGCCGGCTTC GGCTACGGCG TGTACTCAGC CATCGACCAA
GCGCTCAACG TCGACGTGCT GCCGAACAAG GAAGAGGCCG GTAAGGGCCT CGGCATCCTC
AACCTGGCCA CCACGCTCGG CCAAGCAGTC GGTCCCACCA TCACCTCCGT GGTCAAGACC
ACGACCGGCA CCTACACGCC GGCGTTCGCC ATCTCCATCG TCATGGCCGT GTGCGCTGCC
GTGTTCGTGC TGCGTATCCA GAAGGTGAAG TAG
|
|---|
| Protein sequence | MERTKMTLKD LAVSFHFPKF STSRDFYKAF GCRVCMLLSY QMISVYQLYI VEDYVHQTKT
EAAGTIATMS IITMVVSLTA SLISGPISDK MHTHKVPVII ASLLFAIGTA MPWIMPSVTG
MYLYAGIAGF GYGVYSAIDQ ALNVDVLPNK EEAGKGLGIL NLATTLGQAV GPTITSVVKT
TTGTYTPAFA ISIVMAVCAA VFVLRIQKVK
|
|---|
| |