Gene BLD_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0472 
Symbol 
ID6363739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp561556 
End bp562188 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content55% 
IMG OID642679629 
ProductSoxR family transcriptional regulator 
Protein accessionYP_001954416 
Protein GI189439335 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGA CCGGGCTGCA TCTTCATGTT TCGCTTGAGG ACCGTCAGAA TCTGAACGCT 
GACGCGATTC AGGGGGAGTT GTTCTCCAAC GTCGATACTG AGGAGATCAA GCGCGGCTAC 
CGTGGCACTG TGGCCTCCAA GGTGGCCGGC ATCACGTACC GACAGCTCGA TTATTGGGCA 
CGCAAGCAGA TTGTTGAGCC GTCCATCACG CCGTCTCATG GCTCCGGTTC ACGACGACTA 
TACTCGTTTA AGGATGTGGT GATTCTCGCT GTATCCAAGA AGTTGCTTGA TGCCGGTGTG 
AATCTGCAGA ACGTAACGGC GGCCATCGGA TTCTTGACTC AACGCAGCAC CGATCAGCTG 
GCCAATGTGA CCATCATGTG CGATGGTCAA AACGTACATG AATGCACAAC CAGCGAACAG 
ATGCTCGAAC TGTTGCAAAG CGGTAAGGCA GTGTTCGCCG TGTCGGTGGG TTCGTTGTGG 
CACCAGATTG AGACGGCCTT GGAACAGGAA GAATATGTTG ATCTTGAGGC CAAGCCGCTG 
ACGATTGCCA CGGGCCGTCC GATTGATGAA CTGACTGCCA TGAGGATGCG CAAGAAGCTC 
GAGGCACAGC GCTTGCAACG CGCAACCGCC TGA
 
Protein sequence
MGQTGLHLHV SLEDRQNLNA DAIQGELFSN VDTEEIKRGY RGTVASKVAG ITYRQLDYWA 
RKQIVEPSIT PSHGSGSRRL YSFKDVVILA VSKKLLDAGV NLQNVTAAIG FLTQRSTDQL 
ANVTIMCDGQ NVHECTTSEQ MLELLQSGKA VFAVSVGSLW HQIETALEQE EYVDLEAKPL 
TIATGRPIDE LTAMRMRKKL EAQRLQRATA