| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0410 |
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| Symbol | thiJ |
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| ID | 6364417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 489479 |
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| End bp | 490027 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679561 |
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| Product | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein |
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| Protein accession | YP_001954354 |
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| Protein GI | 189439273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.532104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGTCG AAAACAGCAA GGTACTGATC ATCGTCAACA ACTGGGGTAT CGAGGAGACC
GAGCTGACGC GCCCGCTGCG CGATCTCAAG GCCGCCGGCG TCAAGGTGAC GCTTGCCGCC
ACTACCTTGG ACCCGTGTGA GACGGTGCAG CACGACCGCT ACGAAGGTGA AACGCTGACC
CCGGACGCGC GCCTGTCCGA CGTGCAGGCT GCCGACTACG ACCTGCTGGT GGTGCCCGGC
GGCACCTGCA ATGTGGATCG TATCCGCGTC AATGAGGATG CGATCACGCT GGCGCAGGAG
TTCGCGCACG AAGGCAAGCC GATCGCCGCG ATCTGCCATG GCGCGTGGCT GCTGGTCAAC
GCGGGTCTGG TGGCTGGCAA GACCGCCGCG CCCTGCCGCT ATATCGCCGC TGATATCGAG
AACGCGGGCG GCCATTACGT CGACGAGCAG CTGCACGTGG ACGACGCCAA CGGCTTCAAG
CTCATCACGT CCCGCAAGCC CGACGATCTG GACTACTTCG TGGGCGCAAT CAAGGATGCG
CTGAAGTAG
|
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| Protein sequence | MAVENSKVLI IVNNWGIEET ELTRPLRDLK AAGVKVTLAA TTLDPCETVQ HDRYEGETLT
PDARLSDVQA ADYDLLVVPG GTCNVDRIRV NEDAITLAQE FAHEGKPIAA ICHGAWLLVN
AGLVAGKTAA PCRYIAADIE NAGGHYVDEQ LHVDDANGFK LITSRKPDDL DYFVGAIKDA
LK
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