| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0351 |
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| Symbol | topB |
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| ID | 6364585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 426727 |
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| End bp | 428886 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679501 |
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| Product | topoisomerase III |
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| Protein accession | YP_001954295 |
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| Protein GI | 189439214 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG TCATCGCGGA AAAGAAATCG GTCGCCACGG CCATCGCGCA GGCGTTGTGC
GCCGCGCCCG TCCAAAGGGA CGGATGCTAT GAGTGCGGCC AGCTGCTCGT GACATGGGCG
CAGGGCCACC TGATCGACCT TGCCATGCCC GAGGACTACA AGGACAGGGA TTGGAGGAAA
TGGAGTCTGG ACACGCTGCC TGTGGACCCG TCCGGCCATT GGCAGTGGAA GATCAGCGAG
GAGCGCGGTG CCGGCTCCCG CTACCGGCAG ATCGTGCGGC TGATCCGCCG AACGGATGTG
GATTGCCTCG TCAACGCCTG CGACCCCGAC CGCGAGGGTG AGGCCATCTT CCGCCGCATC
GCGGACATGG AAGGCTCTCA CAAGCCGGAA CTGCGCCTGT GGGTGGCGAG CCTGGAGGCG
GAGGCCATCC AGGCCGCGTG GCGGGCGATG AAACCCGAAT CCGAATACCA AGGGCTCGCA
TGGTCGGCGG AGATCAGGTC GAAGGCGGAC TGGCTGATCG GCATGAACGC GAGCCGCGCG
TACTCGCTGC TCTACAACGC ACGGTTCAGC GTGGGCCGCG TGCAGACGCC GACGCTCGCC
ATGATCGCGG AACGCGACCG GCAGATCAGG AACCACAAAC CGGTGCCGTT CTGGACCGTG
ATCGCGGACA TGGGCGGATG GCGGCTCTCC AGCGAACGGA TCGACAGCAA GGATGCGGCG
ATGCTGCTGT GCGGCCAGGC CGAACACGGC CGCTTCCGCA TCATGTCCGT GAACCGGAGG
CGGGTGAACG ACCGGCCGCC CCGCCTGTAT GACCTGACCG GATTGCAGAA GGACATGAGC
CGCATGTACG GCATGACCGC CGCGCGCACG CTCCAGGCGT TGCAGCACCT CTACGAACTC
AAACTCGCCA CCTATCCGCG CACCGACAGC CGGTACATCA CGCATGACGA CCTCGAAACG
CTCACGGCGC TCCTCGAATC CGGCCGTCTC GCCCAAGGGT TCGTCACCCG CGAGGGCATA
CCCGGACACC CGCGCCCGGA ACTCACCGTC AACGACAAGA AGGTGGCCGG CCACACCGCG
ATACTGCCGA CCATGCAATT GGACGCCGGG AAGCTGGAAG GCCTGGACGA TGACGAGCGC
AAGGTGATGA CACGCATCGT GCGCCGCATG TGGGAGGCCG TGGGCGACGA CCATGTGCAC
ATCGTCACCG AGGTGAAGGC CCGGCTTTCC GACGACACCG ACAGGGAGTT CTCCAGTCGT
TCCGACGAGA CCGTATCCGC AGGATGGAAG GCCGTCGAAA CCGGCCACGG GCCCGAACCG
GAAGACGAGG AAACCGCGAA CCCGGCGGGA GGAAGGAACG TGATCCCATC GAACCTCATG
GAAGGCGGCG TCATTCGCCC GGTCGGGAAG GTCACGGTCG AGGAAGGCGA GACCCGGCCG
CCCAAACCGT TCACCGAGGC CACGCTGCTG GCCGCGATGG AGCACGCGAG CCGGTGCGTG
GAGGACAAAA ACCTCAAGGC GGCACTCGAT GACGACGAAT CACATTCCGG CGGCATCGGC
ACACCCGCCA CCCGCGCGGA CACCATCGAA AAGCTCGTGC GCTCCAAACT CGTGGAACGC
AAGGGCCGGC AATTGCACGC CACCACGGAA GGCGAACGCC TCACCGACGT GGTGGAGCCA
CGACTGAAGG ACGTGCTGCT CACCGCACGG ATGGAACAGG CGTTGTCCGA CGTGGAACAC
GGCAAACGAG GCCCGTCTGA GGTGATGGAC ATGTTCCACC GGGAGGCATT GCGAATCCCC
GCCGACGCGA CCGCGAACCT CAAGGCCGAT GCCGTCACAC GAACCGCGAA CACCGACGCG
CAGGAATGGG GCGACTGCCC GCGCTGCGGC CAGCCGGTGA GGAAAACCGG CCGGATGTGG
CAATGCTCCA CGAACAAGAC CGAGAAGACC AAGGACGGCA AGTGGATCGC CGTCGAGGGA
TGCGGCTGGA AGATGTACGC GAGCCTCGCG GGCAAGACCA TCACCGACCA GACCGCGCGC
AGGCTCCTCG CGGGACAATC CGTCACCCTG AAGGGCTTCA CATCCAAATC CGGGAAGAAG
TTCGACGCGG CCATCCGCAT CGACAAGGAA CGCGGCACGG CGTTCGACTT CGACCGCTGA
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| Protein sequence | MKLVIAEKKS VATAIAQALC AAPVQRDGCY ECGQLLVTWA QGHLIDLAMP EDYKDRDWRK
WSLDTLPVDP SGHWQWKISE ERGAGSRYRQ IVRLIRRTDV DCLVNACDPD REGEAIFRRI
ADMEGSHKPE LRLWVASLEA EAIQAAWRAM KPESEYQGLA WSAEIRSKAD WLIGMNASRA
YSLLYNARFS VGRVQTPTLA MIAERDRQIR NHKPVPFWTV IADMGGWRLS SERIDSKDAA
MLLCGQAEHG RFRIMSVNRR RVNDRPPRLY DLTGLQKDMS RMYGMTAART LQALQHLYEL
KLATYPRTDS RYITHDDLET LTALLESGRL AQGFVTREGI PGHPRPELTV NDKKVAGHTA
ILPTMQLDAG KLEGLDDDER KVMTRIVRRM WEAVGDDHVH IVTEVKARLS DDTDREFSSR
SDETVSAGWK AVETGHGPEP EDEETANPAG GRNVIPSNLM EGGVIRPVGK VTVEEGETRP
PKPFTEATLL AAMEHASRCV EDKNLKAALD DDESHSGGIG TPATRADTIE KLVRSKLVER
KGRQLHATTE GERLTDVVEP RLKDVLLTAR MEQALSDVEH GKRGPSEVMD MFHREALRIP
ADATANLKAD AVTRTANTDA QEWGDCPRCG QPVRKTGRMW QCSTNKTEKT KDGKWIAVEG
CGWKMYASLA GKTITDQTAR RLLAGQSVTL KGFTSKSGKK FDAAIRIDKE RGTAFDFDR
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