| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0337 |
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| Symbol | xerC3 |
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| ID | 6364004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 416269 |
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| End bp | 417204 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679487 |
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| Product | Integrase |
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| Protein accession | YP_001954281 |
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| Protein GI | 189439200 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.180562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGTATT GGAACGACAA CAGGAAGAGC TGCGAACACG TCGAGCCACG GGAGGATTGG
AAAGAATCCA TTGAGAAATG GATCGACTGG ATGGACGCCA TCGGACGCAC GAACGACACC
CTGCGCACCC GCTGGTACCA GATCGTTCGA TTCTCCAAAG CCGTCGATAA AAGCATCACC
GACGTGACCG AAGACGACCT CATATTCTAC CTAGCCGGCA TGGGAACCGA AGGCAGACGC
GGAGTACGCA GCTGCGTCAA GGTCTTCTAC CAATGGAGCA TGAAGCGAGG GCTCGCCCAC
TGCAACCCGG CGGACGAAGT GCCCACCGTG CCCATGACCC TTCCGTCCGG CTGCATCTGT
CCCGAGGAGA ACATCGAACA AGGACTCGCA TCACCCGACG AGAACGCGCG GCTGGCCGTC
ATGCTGGGCG CGTTCTGCGG CCTGCGCCGC ATCGAAATGA CCAGAATCAA CCTGAAGACC
GATCTGGAGG AGAACGCCGA GGGCATGGTG CTCCACGTCC ACGGCAAGGG CAACAAGGAG
CGGATGCTTC CCGTGCCGGC AAAGCTCGCT TCGGCATTGC GGAAACGCAC CGGCGTATGG
CTGTTCCCCG GAGACGTGCA GGGACACTGC GGCGTCGATT ACGTGGCGAA GAGGATCAAG
ACGGTAACCG GATACCCGTC GCACAGCCTG CGCCGTAGGT TCGCCACATG CGTCTACTAC
AGGAACGGCT GCAACATCGT GCTTGTCAGC CGTATGCTGG GGCACGCCAA CATCGCCACC
ACCATGCGTT ACATCGGCCT CGTGCAGGAC GAAATGCGCA ACGCCGTGGA ATCCACCACC
CGCACGGATA TGAGACTGAC CATGCCCATG AACCAGGTCG TCGGAACAGC CGGCAGCGTC
GCCACCTATT CCCTTAGCAC CGCGAGGATC GGATGA
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| Protein sequence | MRYWNDNRKS CEHVEPREDW KESIEKWIDW MDAIGRTNDT LRTRWYQIVR FSKAVDKSIT
DVTEDDLIFY LAGMGTEGRR GVRSCVKVFY QWSMKRGLAH CNPADEVPTV PMTLPSGCIC
PEENIEQGLA SPDENARLAV MLGAFCGLRR IEMTRINLKT DLEENAEGMV LHVHGKGNKE
RMLPVPAKLA SALRKRTGVW LFPGDVQGHC GVDYVAKRIK TVTGYPSHSL RRRFATCVYY
RNGCNIVLVS RMLGHANIAT TMRYIGLVQD EMRNAVESTT RTDMRLTMPM NQVVGTAGSV
ATYSLSTARI G
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