| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0252 |
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| Symbol | oppA1 |
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| ID | 6364656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 316304 |
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| End bp | 317944 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679399 |
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| Product | oligopeptide ABC transporter periplasmic protein |
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| Protein accession | YP_001954196 |
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| Protein GI | 189439115 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.213679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AAGCTCTTGC TTTCGCTGCC ATGGCTTGCT CCGTGGCCAT GCTGCTGAGC
GCCTGCGGCG GCTCCAACAG TAACGCTGCC TCCGGTGACA CCGCTGGCTC CAACATCATC
ACTGCGTACA ACTCCGAACC GCAGAACCCG CTGATCCCGG GCAACACCAA CGAAACCGGC
GGCGGCAAGC CGGTCGACCT GCTGTTCTCC CGTCTGGTCT CCTTCGACAA GGACGGCAAG
GCTTCCAACG AAGTGGCCGA GTCCATCACC CCGAACGATG ACGCCACCCA GTACACCATC
AAGATCAAGT CTGGCTGGAA GTTCACCGAC GGCACTCCGG TGACCGCTGA GTCCTTCACC
AAGGCTTGGT CCTACGTGGC CAACGCCAAG AACGCCCAGA AGTGCTCCTC CTTCTTCTCC
GCCATCGCCG GCTATGACGA TCTGCAGAAG GATGGCCTCA AGGGTGACGA GCAGCTCTCC
GGCCTCAAGG TCGTGGACGA CACCACCTTC ACCGTCGACC TGAACCAGTC CGACTCCGTG
TTCCCGATTA AGGTCGGCTA CTCGGCCTTC GCCCCGCTGC CTGAGTCCTT CTACAAGGAC
CCGAAGGCCT TCGGCGAGGC TCCTGTGGGC AACGGCCCGT ACAAGTTCTC CAAGTGGGAC
CACAACAAGG AAATCGCCCT CGTCAAGAAC CCTGACTACA AGGGCAACGA GGACGTCAAG
AACGATGGCG TGACCTTCAA GGTCTACACC GACGACTCCG CCGCCTACCG CGACATTCAG
GCCGGCAACC TCGACGTGAT GGAGTCCGTC CCGGCCGCCT TCACCAAGAC CTTCAAGACC
GACAAGAAGG TCCAGGCTTA CTCCGAGGCC GGCTCCGTCA TCCAGACCTT CACCATCCCG
TCCTCCCTTG ACCACTTCAA GAACGACGAG GAAGGCCAGC TGCGTCGCCA GGCCATCTCC
ATGGCCCTCA ACCGCAAGCA GCTCATCGAC AAGGTGCTCA ACGGCAACGC CACCGCCGCC
ACCGAGTTCA CCTCCCCGAA GACCCCGGGC TACTCCGACT CCCTCAAGGG TGCCGACAAC
CTGAAGTTCA ACGCCTCCAA GGCCAAGGAA CTGTGGGCCA AGGCTGACGC CATCTCCAAG
TACGACGGCC AGCTCACCTT CTCCTACAAC GCCGATGGTG GTGCCAAGCC GCTTTACGAC
GCCGTCGTGA ACCAGCTCAA GAACAACTTG GGCATCGACG CGGCCACCAA CCCGATCCCG
ACCTTCCAGG AATTCCGTGA CGCGGTCACC AACCGTCAGA TGAAGGGCGC CTTCCGTACC
GGCTGGCAGC CTGACTACCC GTCCGCCGAG AACTACCTGT GGCAGCTGTA CTCCACCGCT
GCTGCTGATG GCAACGGCTC CAACGATGGT GACTACAAGA GCCCGGCCTT CGATGACCTG
TGCAAGCAGG CTGCTGCCGC TTCCAGCACT GATGACGCCA ACAAGCTGTA TCAGCAGGCT
GAGGAAATCC TCCTCAACGA CCTTCCGGCC ATCCCGCTGT ACTACTCCAA CGCCTCCGGT
GTGGCTTCCC TCAACGTGAA GTCCGGCTAC GCCTTCGATT GGCAGAACCT CCCGACCTAC
ACCGAGATGT CCAAGAAGTG A
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| Protein sequence | MKKKALAFAA MACSVAMLLS ACGGSNSNAA SGDTAGSNII TAYNSEPQNP LIPGNTNETG
GGKPVDLLFS RLVSFDKDGK ASNEVAESIT PNDDATQYTI KIKSGWKFTD GTPVTAESFT
KAWSYVANAK NAQKCSSFFS AIAGYDDLQK DGLKGDEQLS GLKVVDDTTF TVDLNQSDSV
FPIKVGYSAF APLPESFYKD PKAFGEAPVG NGPYKFSKWD HNKEIALVKN PDYKGNEDVK
NDGVTFKVYT DDSAAYRDIQ AGNLDVMESV PAAFTKTFKT DKKVQAYSEA GSVIQTFTIP
SSLDHFKNDE EGQLRRQAIS MALNRKQLID KVLNGNATAA TEFTSPKTPG YSDSLKGADN
LKFNASKAKE LWAKADAISK YDGQLTFSYN ADGGAKPLYD AVVNQLKNNL GIDAATNPIP
TFQEFRDAVT NRQMKGAFRT GWQPDYPSAE NYLWQLYSTA AADGNGSNDG DYKSPAFDDL
CKQAAAASST DDANKLYQQA EEILLNDLPA IPLYYSNASG VASLNVKSGY AFDWQNLPTY
TEMSKK
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