| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0249 |
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| Symbol | pdhA |
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| ID | 6364653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 313419 |
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| End bp | 314483 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642679396 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001954193 |
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| Protein GI | 189439112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.524671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAGATA CAGTCGGAAT CGTCGGACTC GGATTGATCG GCGGCTCGCT CGCACGCCGC
CTGACCGAGC GCGGCGTGCG CGTCGTCGCG TGGAACCATC GCCCGCACCC CTACGCCCAG
GCCGAAGCCG ATGGCATTTT CTGCAAGAGC ACGCTCTCCG AACTCATGGA TGCCGAGCCG
GATGTGGTCG TGCTGTGCAA TCCGCTCAAG GCGATGCCCG CAATCCTCGC CGCCCTGGCC
CCGCTCATGG GCGACCATCC GAACACCACG CTCACCGACG TGGGCTCGGT CAAGGGCATG
GTCCGCGATC AGGTCAAGGC TGCCGGGCTG GGGAAGTGCT ACGTCGGCGC CCATCCGATG
GCCGGCAACG AACTGTCCGG CTGGCAGGCC GCCGACCCGC ATCTGTACGA CGGTGCCCTA
TGGGCCATCA CCGTGGACGA GTCCACGGAC TACCGCCGCT TCCTCGACGT CGCCGCGATG
ATCACCAAGG ACGTCGGCAA CCGCGTCATC GTCGTGGACG ACGAAACGCA TGACAAGGCC
GCGGCGATGA TCTCCCACAT GCCGCATGTG GTGTCCACCG CGCTGATCAA CGAACTGGTC
GCCAACCCGG ACCGCAACAT CGCCGCCGCG CTGGCCGCCG GCTGCTGGAG GGACATGACC
CGCGTGTCCC TGACCGACCC GGACCGCACG CGCGCGATGG TCGAGGAAGA CTCGCTGAAC
GTCGAAGTGC TGCTGCGCCG CATGGCGGCA CGTCTGACCG ATATGGCCGA CCAACTGCAC
GCTGGTGCCG ACGGCGAGCA GGATGTGATG GGATTCTTCG CCGAAGGCGA CCCCTTCCGC
CGGTACAAGG CCGCCGTGAC GCGAGCCGGC ATCACCGCTG CACAAGCTGG TACGGCCACC
GCGCAGCAAG CCGGCACAAC TGCCGCCGGA TTCCCGGAAC GCGAGCTCGC CGTCCCCGAA
GCCGGCTGGC AGCAGACCTT GCTGTTCTCC GCACGCCGGG GAGAAGCCAT CACCGGTTTC
ATCCATCCGC GTCAGGCCAT CGTCCAACTG CGCCCCGCCA TGTAA
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| Protein sequence | MVDTVGIVGL GLIGGSLARR LTERGVRVVA WNHRPHPYAQ AEADGIFCKS TLSELMDAEP
DVVVLCNPLK AMPAILAALA PLMGDHPNTT LTDVGSVKGM VRDQVKAAGL GKCYVGAHPM
AGNELSGWQA ADPHLYDGAL WAITVDESTD YRRFLDVAAM ITKDVGNRVI VVDDETHDKA
AAMISHMPHV VSTALINELV ANPDRNIAAA LAAGCWRDMT RVSLTDPDRT RAMVEEDSLN
VEVLLRRMAA RLTDMADQLH AGADGEQDVM GFFAEGDPFR RYKAAVTRAG ITAAQAGTAT
AQQAGTTAAG FPERELAVPE AGWQQTLLFS ARRGEAITGF IHPRQAIVQL RPAM
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