| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0169 |
|---|
| Symbol | |
|---|
| ID | 6363051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 212555 |
|---|
| End bp | 212863 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642679315 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001954113 |
|---|
| Protein GI | 189439032 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0650097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGG TCACTAAACG TTCGGGTGGC GTGGAGCCAT TCAGTAGAGA CAAAGTGATT
TCCGGCGTAC GCAAAGCTTG TCAGGGGCGG CCGGTCAGAG AAGAGGATCT GAAGCTGCTG
GGACAGAAAG TCGAAGAGGA TCTTCGCTCC CGAGGCCTTG CCGAAGTCAC CTCAGATGAA
GTGGGCAAAG CCATCCTGAA ACCGTTGCGT GACTTGGATG TGGTGGCGTA CCTTCGATTC
GCGAGTGTGT ACCAGAACTT TGCAGGTCTG GAGGATTTCC AAAGCGCCAT TGATGGTTTG
CGTGAATAA
|
|---|
| Protein sequence | MLLVTKRSGG VEPFSRDKVI SGVRKACQGR PVREEDLKLL GQKVEEDLRS RGLAEVTSDE
VGKAILKPLR DLDVVAYLRF ASVYQNFAGL EDFQSAIDGL RE
|
|---|
| |