Gene BLD_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0143 
Symbol 
ID6363094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp168866 
End bp169666 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID642679283 
Producthypothetical protein 
Protein accessionYP_001954087 
Protein GI189439006 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.23892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGACC GGTATGTGTC GCGGAGCGGC CCCCTGCTGG CGAATGGTCT GGCATATGGT 
CTGCTATTCG CCTTTTTTGC CGGCGTCTGG ATTGCGGTGA GCGTGTTCGG CCTTATCATG
GTCGGCAACA TTGATTGGCA GCAGATGCTG ATCGACGCGG TGCGTGAAGT CATTCCCGGT
GTGGCCGACT CGTTTCTGAC GTCTTCCGCG CTAGGCACCA TGTCAAGCGC ATTGACATGG
ACCGGTCTGG CCACGTTGGC CATATTCTGG TGGACGGTGA CCGGCTGGAT GAACTCGCTG
CGCCACGCCG TACGGGCCAT GTTCGACGAC TGCGGCGACG AGCTCAATAT CGTCGTCGCA
AGGTTACGCG ATACGCTTGC CGCCATCGCC ATCGCAATAC TGTTCATTCT TTCGACCGCG
GCCGGTACGG TGTCCGGCGG CATCGTACGC CGACTGCTGC AATGGGGCGG CATCCCCAGC
AGTTCGTTGC CCGGCACCGT GCTTTTGGAG ATGACCGGTT TCGGTACCGG CGTCGCACTG
AATTTTGCGT TGTTCATGTT GCTGCTGCGC GTGGTCTCCC ACATCAAAGC CGGACGATTC
ACGATACTCG GCGCGTTACT GGGATCTCTG ACGGTTTCCG CAATGCAGCT TCTCGGTGCG
CGACTATTAG CCGGAGCCTC CCGGAATCCG ATGCTTGCCC CGTTCGCCGC GTTGATCGGT
GTGCTCATTT GGTTCAACCT CGTCGCCCAG GTCATTTTGC TCTGTGCCGC CCTCATTGCC
GAGTGCCGAC AAAAGAGCTG A
 
Protein sequence
MLDRYVSRSG PLLANGLAYG LLFAFFAGVW IAVSVFGLIM VGNIDWQQML IDAVREVIPG 
VADSFLTSSA LGTMSSALTW TGLATLAIFW WTVTGWMNSL RHAVRAMFDD CGDELNIVVA
RLRDTLAAIA IAILFILSTA AGTVSGGIVR RLLQWGGIPS SSLPGTVLLE MTGFGTGVAL
NFALFMLLLR VVSHIKAGRF TILGALLGSL TVSAMQLLGA RLLAGASRNP MLAPFAALIG
VLIWFNLVAQ VILLCAALIA ECRQKS