| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0112 |
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| Symbol | sdrC |
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| ID | 6364547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 132057 |
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| End bp | 132938 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679251 |
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| Product | hypothetical protein |
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| Protein accession | YP_001954056 |
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| Protein GI | 189438975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGT TCGAAGTGAA GCATGATTCG CGCCTATCTC GTGGAATCAG CCGTGCTCGG
GCCTATGCGG CCGCTCGTCC GAAACGCCAT TTCGTCGGTG CATTCGCCGT GTTGCTTGGT
GTGGTGATTC TGCTGCTGCC CAGCCCGTAC GTCATCGAGA TGCCCGGACC CACCCAGGAT
GTGCTGGGCA AAGTTGAGGA TGGTGCGGTT ATCGACATCA CTGGTACCGG CGTGACGACG
TATAAGGATT CCGGCAAGCT GCTGCTGACC ACGGTGAACG CGTCCGGCGT GCCCGGGTAC
CCGATCATCA ACGCGCAGGC CGTCTGGGGT TGGTCCAATC CGCAGGTGGA GGTCATGCCG
CGTGAGGCCA CGGTACCGGT GGGCCAGAGC GCGGACCAGT ATCAGAAGAA AGTCGAACAA
GACATGGCCG GTTCCCAGGA TTCGGCCAGT GCCGTCGGTC TGGCGTATGC CAAAGCCCAT
GCGGACGAAC TGGGCATTGA CGCCAGTGCA TTGCAACACG CCAAGGTGAC GATGCACGTG
GACAGCATCG GCGGGCCGTC CGCAGGCATG ATGTACACGC TCGGTCTCAT CGACAAACTC
ACCCCCGCCA ACGAGAGCGG CGGCAAGACC ATCGCCGGCA CCGGCACCAT AGACAAGGAC
GGCAAAGTCG GCAGAATCGG CGGCATAGAG CTGAAGATGC TTGGCTCCAA GCGCGATGGC
GCCACATGGT TCCTGGCCCC CGCGTCGAAT TGTTCGGATG TGGCCGGCCG CGTGCCGGAT
GGTCTGCGCG ACGTCAAGGT CGCCACGCTG GACGAGGCGT ATCAGGCGTT GGTGGCCATC
GGCAAGGGGC AGGCCGACGA TTTGCCTCAT TGCGAGGCCT GA
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| Protein sequence | MPSFEVKHDS RLSRGISRAR AYAAARPKRH FVGAFAVLLG VVILLLPSPY VIEMPGPTQD
VLGKVEDGAV IDITGTGVTT YKDSGKLLLT TVNASGVPGY PIINAQAVWG WSNPQVEVMP
REATVPVGQS ADQYQKKVEQ DMAGSQDSAS AVGLAYAKAH ADELGIDASA LQHAKVTMHV
DSIGGPSAGM MYTLGLIDKL TPANESGGKT IAGTGTIDKD GKVGRIGGIE LKMLGSKRDG
ATWFLAPASN CSDVAGRVPD GLRDVKVATL DEAYQALVAI GKGQADDLPH CEA
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