| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3641 |
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| Symbol | trmE |
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| ID | 6369383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3913895 |
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| End bp | 3915277 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642679056 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001953861 |
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| Protein GI | 189426684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATTC GTGATACCAT TGCTGCCATA GCGACTCCGC TTGGTTCTGG TGGAGTGGGC
ATAGTACGGG TCAGTGGACC TGACGCAGAG CAGATTGGCC GGAAGCTTTT TAAAGGATCA
GGCACGAAGA ACGGCGGTGG CTTTGAGAGC CACCGCCTTT TCTATGGTCG CCTGGTTAAT
CCGCTTGATG ACGGTCTGAT AGATGAAGGC ATGGCAGTTC TGATGCGGGC TCCCCGCTCC
TACACCCGCG AGGATGTGCT CGAGCTGCAC TGTCACGGTG GTTATTATCT GGTTCGTGCC
GTGCTCCAGG CCTGTATTTC TGCTGGTGCC AGGTTGGCTG AACCGGGTGA ATTTACCCGA
CGGGCCTTCC TGAACGGCCG TATCGATCTT GCCCAGGCAG AATCGGTCAT GGACCTGATC
GCCAGCCGTA CAGAACGTTC TTTAAGCCTG GCCCAGTCGC AACGTGAAGG TCATCTGTCC
CGTGCATTAG CTGCCTTGAA GGCACCGCTA GTTGAGTCTT TAGCCTTGGT GGAGGCTCAT
ATAGACTTTC CTGAGGACGA GGTTGATCCT GCTGTCTTCG AGGCCATTGA GACCGGAATT
GCAACGGTTT CTGCCGGAAT CAGCCGACTG CTTGCTACCT TTGCAAGCGG AAAGGTGCTG
CGTGACGGTG TTTCGGTCCT CCTGTTGGGG CTTCCGAATG CCGGCAAATC CAGTCTCTTG
AACGCCCTGT CAGGGACTGA CCGGGCGATT GTCTCAGCAC TGCCCGGTAC CACCCGCGAT
TTGATTGAAG AGACGGTTTC CCTGCAGGGG TTGCCGGTTA AGGTTATTGA TGCTGCCGGT
ATTCGTGCCC ATCACGCCGA CTGTGTCGAG CAGGAGGGGG TCCGCAGGGC GCTTGACAAG
GCGTCTGAGG CTGATCTGCT GCTTTTACTG GTCGATGGCA CTGCCCCGTT GAGTGATGAA
TTGTTGGAGC TGGCTACATC GCTTGCCGCG CTTCCGTATC TGCTGGTGGT GACCAAGTCA
GACCTTCCCC AGTTGCTCGA TCTGTCAGGT CTGGCCGCGC CTCTCGGAGT CTGCAGCGTT
TCTGCAAAGA GCAGGGCCGG TATTGACCGG CTTGCCGCTC AGATTTACGA CCACTTCGTA
CAGTCTTCGG CCTTTTCATC CGATGCTGCT GCTGTGATCT CAAACGTTCG TCATCGTGAT
GTTCTTGTTC GTGCCCAGCG GTCTCTCCAG GATTTTGCCG ACAACCAGTC GCTTGGCTTG
CCGCCGGAGT TGTTAGCTCT GGATCTCAGG ACCGCCCTTG CCGCCCTTGG TGAGATTACC
GGCGAGACCA CGACCGACGA CCTGCTTGAT CTGATTTTCT CTTCGTTTTG TATTGGCAAG
TAA
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| Protein sequence | MYIRDTIAAI ATPLGSGGVG IVRVSGPDAE QIGRKLFKGS GTKNGGGFES HRLFYGRLVN
PLDDGLIDEG MAVLMRAPRS YTREDVLELH CHGGYYLVRA VLQACISAGA RLAEPGEFTR
RAFLNGRIDL AQAESVMDLI ASRTERSLSL AQSQREGHLS RALAALKAPL VESLALVEAH
IDFPEDEVDP AVFEAIETGI ATVSAGISRL LATFASGKVL RDGVSVLLLG LPNAGKSSLL
NALSGTDRAI VSALPGTTRD LIEETVSLQG LPVKVIDAAG IRAHHADCVE QEGVRRALDK
ASEADLLLLL VDGTAPLSDE LLELATSLAA LPYLLVVTKS DLPQLLDLSG LAAPLGVCSV
SAKSRAGIDR LAAQIYDHFV QSSAFSSDAA AVISNVRHRD VLVRAQRSLQ DFADNQSLGL
PPELLALDLR TALAALGEIT GETTTDDLLD LIFSSFCIGK
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