Gene Glov_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_3613 
Symbol 
ID6366540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand+ 
Start bp3883384 
End bp3884049 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID642679029 
ProductRibulose-phosphate 3-epimerase 
Protein accessionYP_001953834 
Protein GI189426657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TAGCACCATC CATACTTTCC GCTGATTTTT CCCGTCTGGG CGACGAAGTC 
CGGGCTGTTG AGGCTGCCGG TGCCGACTAC ATCCATATTG ATGTCATGGA TGGCCGCTTT 
GTACCAAACA TCACCATCGG CCCATTGGTG GTGGAGGCGG TACGCAAGGT AACCAGCCTG 
CCGCTGGATG TGCACCTGAT GATTGAAGAA CCGGAACGGT ATGTGGAAGA GTTTGCCAAG 
GCCGGGGCCG ATATTATCGT GGTGCATGCC GAGGCCTGCC GCCACCTGCA CCGGGTGGTG 
CAGCAGATCA AGGGGCTGGG CAAGAAGGCC GGCGTCTCCC TGAACCCGGC GACACCATTG 
CATGTGCTGG ACTATGTCCT GGAAGAGCTT GATCTGGTGC TGCTGATGAC CGTTAACCCC 
GGCTTTGGCG GCCAGTCGTT TATTGAGGCC TGCATCCCCA AGATTCAAGC CCTGCGTGGC 
ATGCTGGACC GCCGCGGTTG TGAGGCAGAG CTGGAGATAG ACGGCGGTGC CAAGCCATCC 
AATGTCGCCC GGATCGCCCA TGCCGGGGCT GATGTCCTGG TTGCCGGCAG TGCCGTATTC 
GGCAGCAATG ACTACGCTGC CACCATTGCT GAAATGAAGC GCCTGATGCA GGAACCTCGC 
CTGTAA
 
Protein sequence
MKKIAPSILS ADFSRLGDEV RAVEAAGADY IHIDVMDGRF VPNITIGPLV VEAVRKVTSL 
PLDVHLMIEE PERYVEEFAK AGADIIVVHA EACRHLHRVV QQIKGLGKKA GVSLNPATPL 
HVLDYVLEEL DLVLLMTVNP GFGGQSFIEA CIPKIQALRG MLDRRGCEAE LEIDGGAKPS 
NVARIAHAGA DVLVAGSAVF GSNDYAATIA EMKRLMQEPR L