| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3223 |
|---|
| Symbol | |
|---|
| ID | 6365834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3449077 |
|---|
| End bp | 3450114 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642678640 |
|---|
| Product | protein of unknown function DUF1016 |
|---|
| Protein accession | YP_001953449 |
|---|
| Protein GI | 189426272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4804] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0140947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA TCCTGCCCGC CGAATACACA ACATTCCTTC TGGAACTGAA AGAACGAATA
CACAACGCCC AGTACGCCGC ACTGAAGGCA GTAAATAAAG AGCTTATCAG TCTGTACTGG
GACATCGGAA AATCAATAGT CAGCAGACAG GAACAGCTTG GCTGGGGCAA GGCGGTTGTA
GAAACTTTGG CGAGGGATTT ACAGAACGAG TTCCCTGGAC TGCAGGGGTT TTCCTCACGA
AACCTCTGGA ATATGAAGAA CTTTTATCTG GCATACAAGG ACAATCAAAA ACTGCAACCA
TTGGCTGCAG AAATCAGCTG GACGAAAAAT GTCATCATCA TGGAACGCTG TAAGGATCTA
CTTCAGCGCG AGTTTTACAT CAAGATAACC AAGAAGTTCG GCTGGACCAA GGATGTTCTT
ATCAACCAGA TTGAGGCTGG TGCCTTTGAA AAATTTATGG CGAACCAGAC CAACTTTGAC
AAAGCAGTGC CGGAAAAATA CCGGCATCAG GCAAAACTGG CGGTTAAGGA TGAATATACC
TTCGACTTTC TGGAGATGTC CGATGGGCAC TCGGAAAAAG AGCTTGAACG GGCATTGGTG
GACAATGTAC GGAAGTTTCT GGTGGAGATG GGTGGCTACT TTACCTTTGT TGGCAATCAA
TACCGGCTGG AAATTGACGG ATCAGAGTTT TTCATCGATC TGCTTCTGTA TCACCGGCAG
TTGCGCTGCC TTGTTGCAAT TGAACTGAAA ATCGGAGCGT TCAAACCGGA ATATGCAGGC
AAGATGCAGT TTTATCTTTC AGCGCTTAAC GATACCGTTC GATTGCCTGA TGAGGAGCCT
TCTATCGGCA TCATCCTTTG TAAGGAGAAA AGCAGGACCT TTGTCGAATA TGCCTTGAGA
GACAGCAATA AACCGATTGG TGTTTCGACA TACAAGCTTT CAAACAAACT GCCAAAAGAA
CTTAAAAAAT ATTTCCCGTC TCCGGAAGAG ATGAGCAAAC GGATTGAAGG GCTTTCCGGC
AATCTGGAAG ATACCTGA
|
|---|
| Protein sequence | MTNILPAEYT TFLLELKERI HNAQYAALKA VNKELISLYW DIGKSIVSRQ EQLGWGKAVV
ETLARDLQNE FPGLQGFSSR NLWNMKNFYL AYKDNQKLQP LAAEISWTKN VIIMERCKDL
LQREFYIKIT KKFGWTKDVL INQIEAGAFE KFMANQTNFD KAVPEKYRHQ AKLAVKDEYT
FDFLEMSDGH SEKELERALV DNVRKFLVEM GGYFTFVGNQ YRLEIDGSEF FIDLLLYHRQ
LRCLVAIELK IGAFKPEYAG KMQFYLSALN DTVRLPDEEP SIGIILCKEK SRTFVEYALR
DSNKPIGVST YKLSNKLPKE LKKYFPSPEE MSKRIEGLSG NLEDT
|
|---|
| |