| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3216 |
|---|
| Symbol | |
|---|
| ID | 6366087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3440659 |
|---|
| End bp | 3441159 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642678633 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001953442 |
|---|
| Protein GI | 189426265 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0170058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTC CTATTCTCGC TTTTCCCGAC CCGCTTCTCA AGCAAAAATC CGCCCCGGTC
ACCATCATAA CCGATGAGAT TATCCAGCTG GCCAGAGACA TGGCTGAAAC CATGTATGAC
GCCCCTGGCG TCGGCCTGGC AGCACCTCAG ATCGGGGTCC TGCAACGGGT GATCGTGATT
GATGTAGCTG CCAAAAACGA GCCTCCCCAG CTGATTACCG CCATCAACCC GGTTGTCATC
CATGGCGAGG GAGAAACCTA CGAAGAAGAA GGCTGCCTGT CAGTCCCTGA TTTCTCGGCC
AACGTCAAGC GGCATGAACG GGTGGTGGTC AAAGGGCTTT CCCTGGAGGG ACAGGAACGG
ATCTGGCATG CCGATGGACT ACTGGCGGTG GCCTTTCAGC ACGAGATCGA CCACCTGGAT
GGGATTCTGT TCGTGGATCG GCTCTCGCCG CTCAAGCGGG ATCTGTTCGT CAAAAAATGC
AAGAAACGGA GCGCCCAATG A
|
|---|
| Protein sequence | MIRPILAFPD PLLKQKSAPV TIITDEIIQL ARDMAETMYD APGVGLAAPQ IGVLQRVIVI
DVAAKNEPPQ LITAINPVVI HGEGETYEEE GCLSVPDFSA NVKRHERVVV KGLSLEGQER
IWHADGLLAV AFQHEIDHLD GILFVDRLSP LKRDLFVKKC KKRSAQ
|
|---|
| |