Gene Glov_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_2154 
Symbol 
ID6366109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp2300119 
End bp2300619 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content41% 
IMG OID642677567 
Producthypothetical protein 
Protein accessionYP_001952390 
Protein GI189425213 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACC GTGGTTTTTC TCTGACAGAG TTGATAGTCG TTATTGCCTT GATTTCAATC 
ATGCTGGCTG TAGCGACCTT GAACTTCAAT GATTGGCAGA AAAAATATAA TATTGAAGGC
CAGGTTAAAG AGATGCTTGG GGATCTGACG GATGTACGCA CCAGAGCAAT AGCGACTAAA
CAACAGCATA GGGTGATTCT TAATCCCACA TCTTATGCTT TTCGTCGTTA CAGTAGTGAG
TTCGATGTAA ATGGTACAGA GGTGTTTAGT AAAAATCTTA AGTATTCGGT TCAACAACTT
AAATCAGATG GAACATATGC CGCATTCACT AACACGATAC TGAGCTTTGA TGATCGTGGC
TATACCAACG ACTGGTTGAC TATTGCCGTT GGAGTTGGGG TAGGAAGTCC GGCATATAAC
TGCCTTGGGG TGTCTACCGC AAGGGTAAAC ATGGGGAAAA TTAATGAAAC TCTTAGTCCC
AAAAAGTGTG AATACCAATA A
 
Protein sequence
MNNRGFSLTE LIVVIALISI MLAVATLNFN DWQKKYNIEG QVKEMLGDLT DVRTRAIATK 
QQHRVILNPT SYAFRRYSSE FDVNGTEVFS KNLKYSVQQL KSDGTYAAFT NTILSFDDRG
YTNDWLTIAV GVGVGSPAYN CLGVSTARVN MGKINETLSP KKCEYQ