| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1993 |
|---|
| Symbol | |
|---|
| ID | 6369338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2119028 |
|---|
| End bp | 2120806 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642677405 |
|---|
| Product | oligoendopeptidase, pepF/M3 family |
|---|
| Protein accession | YP_001952229 |
|---|
| Protein GI | 189425052 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000167694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAC CTGACCTGAC CTGGAATACC GCCCTGCTCT ACCCTGCCCC CGACTCCCCG
GAGCTTGAGG CTGATCTTGC CTCATTTGAT CAGCTGGCCG CTGACTTTCG CGCCCAATAC
TTTGAAAAGA TCGCAACGCT GTCCCCCTCT GATATACTCA AGGCACTGTC TGAGTACGAG
GCAATGCAGA CCCGGATGGC AAAGCCGTTC TGCTACAGCC ACCTGCTGTT TGCCTCAGAC
TCCGGCAACG AGATCCACCG CGCCCTGTCC CAGCGCTGCT CCGAGCTGGG CAGCCGCCTC
TCGCAAGCGC TCTTGTTCTT TGATCTGGAG CTGATGAACC TGCCGGATGA TCTTTTCAGC
CAGGTCTGCA GCCTGCCCGG AGCATCCGGA TATGTCCATT TTCTGGAAGG TATCCGCAAG
TTCAAACCGT ACACCCTGCA GGAAAACGAG GAACGCCTCC TGACACGTAA AGACCTGACC
GGTAGCCGTG CCTTTACCAA GCTGTTTGAT GAGCTGTCTG CTTCCCTAAC GTATCAGATG
GAGTTTGAAG GTGAGGTAAA GGAATTTACC GGCGAAGAAC TGCTCTCCCT GCTGCACCAT
CCCTCGGCAG AGGTCCGCTT TAACGCCCAG ACCTGTTTTT TGGAAAAACA TGCAGAGTCC
GGCAATGCCC TGGTCTTTGG CACGGTCTTC AACACCATGG CCCTGGACCA TGGCCAGGAG
ATGGAACTGC GGGGCTACCA GTCTGCGATC CAGCCCACCA ACATTGGCAA CGAACTAACC
GACGAGGCGG TGGAACACCT GATGCAAACC ACTGAGGCCA ACTACGGTCT GGCCCAGGAA
TACTTCCGCC TCAAGGCAAA GATGCTGGGC ATGGACAAGA TCCGCAACTG CGATGTCTAT
GCGCCGGTGG CAGAGGCACA GAAAAAGTAT GAGTTTGACG AAGCCCGCGA CCTGACGGTT
GCAGCCTACC GCAACTATGA CCCTCAGTTT GGCGATATTA TCAAGGCCTT TTTTGACGAG
CGCAGGGTGG ATGTCATGCC ACGCCAGGGC AAGTCCGGCG GCGCCTTTGC CATGGGTATC
TCGCCGGTTG ATCCACCCTT TCTGCTTTTG AACTTCACCA ATAATCTTCG TGATATCGCA
ACCATTGCCC ACGAAGCCGG CCATGGTCTG CATTTTGTCC TGTCCCAGAA GCAGAACAGC
CTGAACTACC ATGCTCCGCT GCCACTGGCA GAAACCGCCT CGGTCTTTGG CGAGATGCTG
CTGACCCGCA TGCTGCTGGA TACGGAAACT GATCCTGAGG TTCGCAAATC ACTGCTCTGT
GCCAAGATAG AAGATATCAT TGCCACCACC TTCCGCCAGA CCGTTCTGAC CCGCTTTGAG
CTGCGGCTGC ATCAGGAACG ACAGCAGGGA CTGCTTTCCA ATGAGCGGAT CAGCCAGATC
TGGCTGGAAG AGAACAGCAA ACTGTTCGGC GATGCGGTAG AGATGATACC GGCCTATCAA
TGGGGCTGGT CCTACATCAG CCACTTTATT CACAGCCGGT TCTACTGCTA CTCCTACACC
TTTGCCGAGC TGCTGGTACT GGCGCTGTAC CAGCAGTACC GAGAAACCGG AGACGCCTTC
AAGCCGGGCT ATCGTGCCCT GCTGGAGTCA GGCGGTGCGC TGTCGCCAGC CGACACTGCC
AAACTGGCCG GGATTGATAT TGAAAGCTCC GGCTTCTGGC AAAAAGGGCA TGACTTTCTG
GAAGGATTGA TTGAGGAATT GAAGGCGATG GTCTCTTAA
|
|---|
| Protein sequence | MSQPDLTWNT ALLYPAPDSP ELEADLASFD QLAADFRAQY FEKIATLSPS DILKALSEYE
AMQTRMAKPF CYSHLLFASD SGNEIHRALS QRCSELGSRL SQALLFFDLE LMNLPDDLFS
QVCSLPGASG YVHFLEGIRK FKPYTLQENE ERLLTRKDLT GSRAFTKLFD ELSASLTYQM
EFEGEVKEFT GEELLSLLHH PSAEVRFNAQ TCFLEKHAES GNALVFGTVF NTMALDHGQE
MELRGYQSAI QPTNIGNELT DEAVEHLMQT TEANYGLAQE YFRLKAKMLG MDKIRNCDVY
APVAEAQKKY EFDEARDLTV AAYRNYDPQF GDIIKAFFDE RRVDVMPRQG KSGGAFAMGI
SPVDPPFLLL NFTNNLRDIA TIAHEAGHGL HFVLSQKQNS LNYHAPLPLA ETASVFGEML
LTRMLLDTET DPEVRKSLLC AKIEDIIATT FRQTVLTRFE LRLHQERQQG LLSNERISQI
WLEENSKLFG DAVEMIPAYQ WGWSYISHFI HSRFYCYSYT FAELLVLALY QQYRETGDAF
KPGYRALLES GGALSPADTA KLAGIDIESS GFWQKGHDFL EGLIEELKAM VS
|
|---|
| |