Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1471 |
Symbol | |
ID | 6366386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1537862 |
End bp | 1538590 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642676872 |
Product | ABC transporter related |
Protein accession | YP_001951710 |
Protein GI | 189424533 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.51412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCAC TGAACCAGGT CACCAAAAAC TTCGCCATCG GCCCGGCCAC CAGCTTTACC GCGGTGGATA ACGTGAGCCT GACCATTACA CGCAGCAGCA TGACGATCCT GAAAGGCCCC AGCGGATCAG GCAAGACCAC CCTGCTGGCC TTGATCGGCT GCATGACCAG ACCAAGTTCG GGGCGGATCA TGCTGCAGGG GGTAGAGACC AGCTTCTTTC AGGCAAGCGA GTCAGCTGAG GGGTTTGACA GTTCCAGCCT GCCGGAGCGG TTCCTGACCG AGATCCGCCG TTCCACCTTT GGTTTCATCT TTCAGCAGTT TAACCTGATC AAGGGGATCA GCGCCCTGCA GAACATCATG CTGCCGGCCT ACCCCACCGG CGAACAGCAG CCGGTGGTCA AGCAGCGGGC ACTGGGGCTG ATGGAACAGT TTGATCTGCT GCGTCATCGT AACTCGCCGG TGGAATGGCT CTCCGGCGGG GAACTGCAGC GGGTTGCCAT TGCCCGCGCC CTGATCAACA ACCCGATCGC CATTATTGCC GATGAGCCGA CCGCCCACCT GGACAGTCAA CTTTCTCAAG CATTCATGGA GAGCATCGGC CAGCTGAAAG ACAGTGGCAA GACCGTACTG ATCGCCAGCC ATGACCCGAT TGTCTACAGT TCGCCATTGG CAGACCAGGT GCTGGAGATG CGTGATGGCC GGATTGTCCG GCAGGAACTG TTGCCGTGA
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Protein sequence | MIALNQVTKN FAIGPATSFT AVDNVSLTIT RSSMTILKGP SGSGKTTLLA LIGCMTRPSS GRIMLQGVET SFFQASESAE GFDSSSLPER FLTEIRRSTF GFIFQQFNLI KGISALQNIM LPAYPTGEQQ PVVKQRALGL MEQFDLLRHR NSPVEWLSGG ELQRVAIARA LINNPIAIIA DEPTAHLDSQ LSQAFMESIG QLKDSGKTVL IASHDPIVYS SPLADQVLEM RDGRIVRQEL LP
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