| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1383 |
|---|
| Symbol | |
|---|
| ID | 6366451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1419514 |
|---|
| End bp | 1420677 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642676785 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001951624 |
|---|
| Protein GI | 189424447 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000962072 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGT GGGACAAATT AAAAGCTGAA CTGATTGACA TTGTCCAATG GCTGGACGAC
ACCAACGACA CCCTGATTTA CCGTTTCCCT CGCTACAACA ACGAGATAAA GAATGGTGCC
AAGCTGGTGG TCCGTGAAGG ACAGGCAGCG GTCTTCATCA ACGAAGGCCA GATTGCCGAT
GTCTTTAAAC CGGGCACCTA TGACTTGACC ACTCAGAACC TGCCGATCCT GGCCACCCTC
AAGGGCTGGA AATACGGTTT TGAATCCCCC TTCAAGGCCG AGGTCTACTT TGTCTCAACC
CGCCAGTTCA CCAATCTCAA GTGGGGTACA CCCGGTCCCT GCACCATGCG CGACCCGGAG
TTCGGTGCGG TGCGGGTAAC GGCCTTCGGC ATCTATTCGA TCAAGATCAA GGATCCGGCT
GTATTCATCC GTGAGATCGC AGGAACCGAC GGTGAATTCA ACACTGATGA AATTCAGGAC
AACCTGAAAG GTAAGATCGG GATGCGGATC AAGGAAGTAA TGCCGGAGCT GCAGATTCCG
GTGATTGACC TTGAGAGCAA GGTTTTTACC ATGGGTGAGA TGTTGAAAGA GCGGATAGCC
CCGGCCTTTG AAGGGTTGGG AATCGCCCTG ACCGAGGTAC AGGTACAGGA TGTGGGTCTG
CCGGAAGAGG TGGAGCGGGC GATTGACAAG GCCGGCGCCA TGCGGGCCAT CGGCAATATG
CAGATGTACA CCCAATACGA GACCGCCAAT TCCATCAATG ATGCCGCCAA CAATCCCGGC
GGTCTGGCTG CGGCCGGTGT GGGGATCGGC ATGGGGTTTG GCATGGGCGG CCAGATGGGC
AATGCCATGG GAGGCGCCTT TACCAACATG GTGCAGCAGC CCGGTATCAC GCCGGGATTC
TCCGGTACTG GCCAGTCGGC ATCTCAGCCG CCACCAATGC CCGGACCGCC CCCTCTACCC
CAGCTGAACC TGTTTGTGGC CATGAACGGT CAGCAGGCGG GTCCGTTTGA GGCCCCGGCT
CTGCAGCAGA TGGTTATGAG CGGGCAACTG ACCCGTGAAA CCCTGGTCTG GAAACAGGGC
ATGGCAAGTT GGGCAGCAGC CGGCACCCTG GCTGAGCTGG CTCCGGTCTT TGGCGCAGTC
CCGCCCCCCA TGCCTCCGGC GTAA
|
|---|
| Protein sequence | MALWDKLKAE LIDIVQWLDD TNDTLIYRFP RYNNEIKNGA KLVVREGQAA VFINEGQIAD
VFKPGTYDLT TQNLPILATL KGWKYGFESP FKAEVYFVST RQFTNLKWGT PGPCTMRDPE
FGAVRVTAFG IYSIKIKDPA VFIREIAGTD GEFNTDEIQD NLKGKIGMRI KEVMPELQIP
VIDLESKVFT MGEMLKERIA PAFEGLGIAL TEVQVQDVGL PEEVERAIDK AGAMRAIGNM
QMYTQYETAN SINDAANNPG GLAAAGVGIG MGFGMGGQMG NAMGGAFTNM VQQPGITPGF
SGTGQSASQP PPMPGPPPLP QLNLFVAMNG QQAGPFEAPA LQQMVMSGQL TRETLVWKQG
MASWAAAGTL AELAPVFGAV PPPMPPA
|
|---|
| |