Gene Glov_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_1378 
Symbol 
ID6369219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp1414198 
End bp1414980 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID642676780 
Productmethylmalonyl-CoA decarboxylase 
Protein accessionYP_001951619 
Protein GI189424442 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.526111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAGA TACTGACGGC TGTTTATAAT CAGGTTGCCA CCATTGCGCT TAATCACCCG 
GAAACAAGAA ACAGCCTCAG TTGCCAGATG CTGGAGGAAA TGCTTCAGGC TATTGAACAG
TTTTCACATG ACGAAAATGT TCGGGTTCTG GTGATTCGTG CACCCCGGGG GACGAAGGTC
TGGTCGTCAG GTTTTAATAT CCATGAGCTG CCGGTATCAG GTCGAGACCC CCTCTCATAC
AATGACCCGC TGGAATGCCT GCTGCGGGCT GTGGCCCGTT TCCATTCACC GGTGATCGCC
ATGATTGAAG GGTCTGTCTG GGGAGGGGCC TGTGACCTTT CCTTTGTTTG CGATATTGCC
ATCGGCTGTC CAACCTCATC GTTTGCGATT ACACCTGCCA AGTTAGGGGT ACCCTATAAT
ATTTCAGGCA TCATGCATTT TTTCAATATT GTCGGCCCCC GGATAGCCCG CGAGATGTTT
TATACGGCTG AACCTATCTC CGCTGAACGG GCGCTTCAGG TCGGCATCTT GAATCATCTG
GTGTCTGTTG AAGAACTTGA GGCGTTTACC TATGCCATGG CTGGCAGGAT AGCGGACAAC
TCACCTTTGG CTAACCGTGT CATGAAGGAA CAGCTGCGTT TGCTGGCTGA TGCCTATCCT
TTGCGTCCCG AGACCTTTGA ATATGTCCAG GGATTGCGTC GTATGGCCTA CGATAGTAAG
GACTATGAAG AAGGGAAGCG TGCCTTTCTT GAACGGCGTA AGCCGGTTTT TAGCGGGAAA
TAA
 
Protein sequence
MSQILTAVYN QVATIALNHP ETRNSLSCQM LEEMLQAIEQ FSHDENVRVL VIRAPRGTKV 
WSSGFNIHEL PVSGRDPLSY NDPLECLLRA VARFHSPVIA MIEGSVWGGA CDLSFVCDIA
IGCPTSSFAI TPAKLGVPYN ISGIMHFFNI VGPRIAREMF YTAEPISAER ALQVGILNHL
VSVEELEAFT YAMAGRIADN SPLANRVMKE QLRLLADAYP LRPETFEYVQ GLRRMAYDSK
DYEEGKRAFL ERRKPVFSGK