Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1378 |
Symbol | |
ID | 6369219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1414198 |
End bp | 1414980 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642676780 |
Product | methylmalonyl-CoA decarboxylase |
Protein accession | YP_001951619 |
Protein GI | 189424442 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.526111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAGA TACTGACGGC TGTTTATAAT CAGGTTGCCA CCATTGCGCT TAATCACCCG GAAACAAGAA ACAGCCTCAG TTGCCAGATG CTGGAGGAAA TGCTTCAGGC TATTGAACAG TTTTCACATG ACGAAAATGT TCGGGTTCTG GTGATTCGTG CACCCCGGGG GACGAAGGTC TGGTCGTCAG GTTTTAATAT CCATGAGCTG CCGGTATCAG GTCGAGACCC CCTCTCATAC AATGACCCGC TGGAATGCCT GCTGCGGGCT GTGGCCCGTT TCCATTCACC GGTGATCGCC ATGATTGAAG GGTCTGTCTG GGGAGGGGCC TGTGACCTTT CCTTTGTTTG CGATATTGCC ATCGGCTGTC CAACCTCATC GTTTGCGATT ACACCTGCCA AGTTAGGGGT ACCCTATAAT ATTTCAGGCA TCATGCATTT TTTCAATATT GTCGGCCCCC GGATAGCCCG CGAGATGTTT TATACGGCTG AACCTATCTC CGCTGAACGG GCGCTTCAGG TCGGCATCTT GAATCATCTG GTGTCTGTTG AAGAACTTGA GGCGTTTACC TATGCCATGG CTGGCAGGAT AGCGGACAAC TCACCTTTGG CTAACCGTGT CATGAAGGAA CAGCTGCGTT TGCTGGCTGA TGCCTATCCT TTGCGTCCCG AGACCTTTGA ATATGTCCAG GGATTGCGTC GTATGGCCTA CGATAGTAAG GACTATGAAG AAGGGAAGCG TGCCTTTCTT GAACGGCGTA AGCCGGTTTT TAGCGGGAAA TAA
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Protein sequence | MSQILTAVYN QVATIALNHP ETRNSLSCQM LEEMLQAIEQ FSHDENVRVL VIRAPRGTKV WSSGFNIHEL PVSGRDPLSY NDPLECLLRA VARFHSPVIA MIEGSVWGGA CDLSFVCDIA IGCPTSSFAI TPAKLGVPYN ISGIMHFFNI VGPRIAREMF YTAEPISAER ALQVGILNHL VSVEELEAFT YAMAGRIADN SPLANRVMKE QLRLLADAYP LRPETFEYVQ GLRRMAYDSK DYEEGKRAFL ERRKPVFSGK
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