| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1327 |
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| Symbol | |
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| ID | 6369485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1371949 |
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| End bp | 1372605 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642676724 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001951568 |
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| Protein GI | 189424391 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000159505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCGACA ATCAGATTCA TCACGTTATG ACTGTTTTGG CAGAGGAGTG CCGGCAATGG
GAGACTCCTT CGGTAACCGT CATTTCAGAA CAGCACCGTT CAGCCTTTCA TGTTCTGGTC
TCCTGCATAA TCTCGCTGCG CACCAAGGAC GCCGTTACAG CCGCTGCCTC GGCCCGTTTG
TTTGAGCGGG CAGCCTCTCC CGAGGCAATG ATCTGTCTTA CGCCTTCTGA GATAGCTGAT
CTGATCTATC CTGCGGGCTT TTATCGTACA AAAGCTGAAC AAATTCATGC AATCTGCAGA
ACGTTGCTTA CAGAGTATAA TGGCAGCGTG CCGGATAATC TTGAACAGCT GCTCCGCCTC
AAGGGGGTCG GTCGTAAAAC TGCAAATTTG GTGATGACCC TTGGGCATGA CAAACAGGGG
ATCTGCGTCG ATATCCATGT GCATCGCATA ACAAACCGCT GGGGCTATGT TAACAGCGGC
TCCCCTGACG AGACAGAACA GTTTCTGCGT GAAAAACTGC CTGCGGAGTA TTGGAAAAAA
ATCAATGATC TTCTGGTCTG CTATGGCCAG AATCTGTGCT ATCCTGTTTC TCCGGCCTGT
TCCCGGTGCC GATTGCTGGA CTGCTGCAGC AGGGTTGGGG TACAACGTAG CCGCTAG
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| Protein sequence | MRDNQIHHVM TVLAEECRQW ETPSVTVISE QHRSAFHVLV SCIISLRTKD AVTAAASARL
FERAASPEAM ICLTPSEIAD LIYPAGFYRT KAEQIHAICR TLLTEYNGSV PDNLEQLLRL
KGVGRKTANL VMTLGHDKQG ICVDIHVHRI TNRWGYVNSG SPDETEQFLR EKLPAEYWKK
INDLLVCYGQ NLCYPVSPAC SRCRLLDCCS RVGVQRSR
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