| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1094 |
|---|
| Symbol | |
|---|
| ID | 6366975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1142739 |
|---|
| End bp | 1145447 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642676489 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001951336 |
|---|
| Protein GI | 189424159 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0433151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCT TGTTCATCTG TATCGGTATC ATTGCAGGCG GCATGCTGTT TCATTTCCCC
GGCGCAGTTT CAGGCGGGAT TATCGGCTGG CTTTACAGCA GCGTGCAGTT GCTGAAAACA
GCTCAAGACA AGCAACAGCA GGAGCTTAGC TGGTTGAGAT CACGGTTATC CGCACACCTG
CGGGATGATC CGGATCTGGC AAAGCCAGAA CCGGATCAGA CACCCAAGCC GGTGCCCGTA
GTCAGTCCCC CCGCTGCCAC GCTGGACCGT CCACTGCACA GCCGCCCCGC CTGGCAGCAG
AAGCAACCAA CACGACCCAA TGCAGACAGG ATTGACAAAA GCGAGCCAAG CTACACCTTC
CAGTACACCA CAACACCGGC AACACCAGCC GAACCAACGG CACTGGAAAA CGTTCTGAAG
GCCATCTTTA ACGGTGAGAA CCTGCTGGTA AAACTGGGGG TGCTGATCCT GTTTTGTGGC
ATCGCCTTTC TGGTCAAGTA TGCAGCCCAA CGTGGCATGT TTCCGCTGGA ACTACGCCTG
CTGAGCGCTG CTGCCGGAGG CGTGGCTTTG CTGGCAACCG GCTGGAAGCT GCGCACCAAG
CGGGCCGAAT ACGCCCTGGC GCTGCAGGGG GGCGGCATCG GCATTCTCTA TCTAGTCAGT
TACGCCGCAT TCCGGCTATA CGGGCTGATC CCTGCGGTTC CTTCCTTTGC GCTGCTGGTG
GTAATCTCTG GCCTGTGTGC TGCACTGGCA CTGTTGCAGG AATCACGCAC CATGGCCCTG
TTCGGCATAA TCGGCGGTTT TGCTGCACCG TTTCTGGCTT CAGTAGGCAT CGGAGACCCG
TCAGTGCTGT TCGGCTATTA CACGGTGCTG AATATTGTTG TGATCAGCAT CGCCTGGTTC
CGCTCATGGC GCTCCATCAA CCTGACCGGC TTTAGTGCCA CCTTCCTGCT GAGCGCCATC
TGGGGAGCAA ACTACTACAG ACCGGCGTAT TTCAGTTCGG TGGAGCCGTT CCTGATCCTG
TTCTTCCTGA TCTACCTGGG GGTTAGCGTG CTGTTCTCAC TGCGCCAACC ACCTGATCTA
CGTGGTATGC CCGATGCAAC CCTGGTGTTC GGTACACCAC TGGCAGCCTT TGCCCTGCAA
TCAGCACTGG TCAGCGACTT TCGCTACGGC ATGGCCTGGA GCGCCCTGGC TGCCGGACTC
TGCTACCTGG CCTGCTGCCG TCTGCTCTGG AACCGGGGCC ACCAGCTGCG CCCGCTGGCT
GCATCATTTC TGGCGCTGGC AGGCATACTA CTGAGCCTGA GCATACCGCT GGCCTTTGAC
GGCCGCTGGA CCTCCGCTGC CTGGGCATTG GAAGGGGCAA CCATGGTCTG GCTGGGTTTC
AGGACAGAAC GCCGACTGGT GCGGGCCAGC GGTTATCTGC TGCAGCTTTT GTCCGGTCTG
GCCTTTGCCT CCGCTATGGC CCACACCACC AGCAACGTGC CGCTGCTAAA CAGCTTCTAT
CTGGGCTGCC TGCTGATCAG CCTGTCCGGC CTGTACAGCG CCTTTCTGCT GCAGCGCCAT
CCGCTCCAGA TACAGGAATG GGAGCAACCG TTTGAGTATC TGCTGATCGC CTGGGGACTC
TGCTGGTGGT CCGGTGGCGC CATCCGGGAG CTGGAACAAA ACGTGGACAA GGAATTCCTG
TATGGCGCAA TCCTGTTGTT CGCTGCCCTT TCAGCCCTGC TGATCCGGTT ATCTGCACGC
AAGCTGCAGT GGCAGAACTT TGGCTGGACC AGCCTGCTTC TGCTACTACT GATGCCCGCA
GCCGCAGTGG CCTGGTTTCC TGCCCATCCC CTGGCCCATG GCGGCTGGTT TGCCTGGCCG
ATCGCCTTTA GCACAAGCTG GTGGCTGCTG TACTCCCACG ACCAGCAGTT GCCTGCCACG
TTCAAACCAT ATCCCCATGC CCTGCTGGTA TGGTTACTGG CACTGCTGGG CACCCTTGAG
CTTGGCTGGC AGGTATCATT TGCCATGCTG CAGCAGGGTA GCTGGCAGGA GATCAGCCAG
GTGCTGATGC CGGTCAGTCT GCTGGGGCTG CTGGTGATCG GTAACCGAAC CAGCATCTGG
CCGTTCCGCC AGGAACAGAT TACCTATCAG GGGATCATCG CCCTGCCCCT TGCGGTCTGG
TCTCTGGGCT GGGTCCTGGT CAGTTCCTTG ACCTGCGTTG GCGACAGTGG CCCGCTGCCC
TGGCTGCCAC TGCTGAACCA GTTTGATCTG ACCATCCTGG CTGCCATTGC CGTGCCGCTG
ATCTGGCTCC GCAGCCTGTA TACCATGGAT GAATTCCGGG AGCTGCTGCG TGAACTGCAG
CTTTCGATCA CTGCCGTCTT CAGCGCTGTT TCCTTTGCCT GGCTGAACGG CATCCTGGCC
CGCAGCCTGC ATTACTGGGG CGAGATACCG TTCACAGCCC ATGGCATGCT GCACTCACCC
TTGGCCCAGG CATCCTTCTC AATCTTCTGG AGCCTGTTGG CGCTGCTTGC CACCCTGTAT
GCGGTCCGGC ACAGCAACCG CCTGATCTGG CTCTGCGGGG CAACGCTACT AGGGGTTGTG
GTTGCCAAGC TGTTTATGAT AGATCTTGCA GGTCACGGCA CCATAGCCAG AATCGTATCA
TTTGTTGCCG TAGGACTGTT GCTGCTGGTG ATCGGCTGGT TCGCACCGGT GCCACCGAAA
CAAGAATAG
|
|---|
| Protein sequence | MTLLFICIGI IAGGMLFHFP GAVSGGIIGW LYSSVQLLKT AQDKQQQELS WLRSRLSAHL
RDDPDLAKPE PDQTPKPVPV VSPPAATLDR PLHSRPAWQQ KQPTRPNADR IDKSEPSYTF
QYTTTPATPA EPTALENVLK AIFNGENLLV KLGVLILFCG IAFLVKYAAQ RGMFPLELRL
LSAAAGGVAL LATGWKLRTK RAEYALALQG GGIGILYLVS YAAFRLYGLI PAVPSFALLV
VISGLCAALA LLQESRTMAL FGIIGGFAAP FLASVGIGDP SVLFGYYTVL NIVVISIAWF
RSWRSINLTG FSATFLLSAI WGANYYRPAY FSSVEPFLIL FFLIYLGVSV LFSLRQPPDL
RGMPDATLVF GTPLAAFALQ SALVSDFRYG MAWSALAAGL CYLACCRLLW NRGHQLRPLA
ASFLALAGIL LSLSIPLAFD GRWTSAAWAL EGATMVWLGF RTERRLVRAS GYLLQLLSGL
AFASAMAHTT SNVPLLNSFY LGCLLISLSG LYSAFLLQRH PLQIQEWEQP FEYLLIAWGL
CWWSGGAIRE LEQNVDKEFL YGAILLFAAL SALLIRLSAR KLQWQNFGWT SLLLLLLMPA
AAVAWFPAHP LAHGGWFAWP IAFSTSWWLL YSHDQQLPAT FKPYPHALLV WLLALLGTLE
LGWQVSFAML QQGSWQEISQ VLMPVSLLGL LVIGNRTSIW PFRQEQITYQ GIIALPLAVW
SLGWVLVSSL TCVGDSGPLP WLPLLNQFDL TILAAIAVPL IWLRSLYTMD EFRELLRELQ
LSITAVFSAV SFAWLNGILA RSLHYWGEIP FTAHGMLHSP LAQASFSIFW SLLALLATLY
AVRHSNRLIW LCGATLLGVV VAKLFMIDLA GHGTIARIVS FVAVGLLLLV IGWFAPVPPK
QE
|
|---|
| |