| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1013 |
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| Symbol | |
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| ID | 6369175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1052745 |
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| End bp | 1054505 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642676408 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD family |
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| Protein accession | YP_001951256 |
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| Protein GI | 189424079 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.241628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGA AAAATATTGA TGAAGTCAAG CAGTTGATTG ATATCGGCAA GGAAAAGGGC
TTTTTGACCT TTGACGAGGT AAACGACATT CTCCCGCCTG ATATCGCCAC CGAGCAGATC
GATGACGTGA TGGGGATGTT CGGAGACATG GATATCGAGA TCGTTGACTC GGCCCAGAAG
GTCAAGATTC CCAAGATCAA GATCGATCTG GAAGAAGGGG AAGAAGAGGC CGAAGGTGAG
GCTGAAGAGG TAGAGTTTGA GCCGGGCGCC ATCGGACGCA CCAGTGACCC GGTCCGGATG
TACCTGCGTG AAATGGGCTC GGTCTCCCTG CTGACCCGTG AGGGTGAGGT TGAGATTGCC
AAGCGGATTG AAGACGGTGA CCGGGAAGTG GCCGGCATCA TCCTCAACAC CCCGATTACG
GTTAAGGAAG TACTGGCGCT GGGTGAAAAA CTGCGCAAGT TCCAGATCAC CCCTTCAGAG
ATCAGCAAAG ACATTGAAGA GGATGCTGAT GTTGATATCG AAGAGGGGGA AGAGGATATC
CAGCAGATCC GCCTGCTGGA GACGATTGAC GCCATTGCCG CCAGTGAGCA GGAGATCAAC
GAACTGTTGA CCGCGCTGGA GTCGGCCAAG GCAGCTGCCA AGAAAAAGGA ACTGGAAAAG
AGCCTGAAGG AGGCCAAGGA GCATCTGGCA GAACTGCTGC GTTCGCTGCG GATGAAGGAC
CGCCATATCA CCAGGGTTGC CGACCGCCTG AAAGAACTCT CCTCCAAGGT TAACCGGGTC
AAGAATGAGC TGGCCGAGGT GCATAATGTT GTGCCGCCTG ACAAGCTTGC AGAGCTGCTG
GAAAAGTTCA GAGCCGATGA GGCAAAAGGG ATGGCCGCCC TCAAACCGCT CAAACTGAGT
GATGAGGACT TCCAGAAAGT CGAGAAGCGC CTCAAGAATG CCGCCCGTAA GCTGACCAAG
GTTGAACAGG AATCCGGTTT CAAGGCAACC GAGCTTTCCA AGGCGATCCG GGCGATCCGC
GAAGGTGAGC ATAAGGCACG CATCGCCAAA TCAGAGCTGA TTGAAGCCAA CCTGCGTCTG
GTGGTCTCGA TTGCCAAAAA ATACACCAAC CGCGGCCTGC AGTTCCTCGA CCTGATTCAG
GAAGGCAACA TCGGCCTGAT GAAGGCGGTG GACAAGTTTG AATACCAGCG TGGCTACAAA
TTCTCAACCT ACGCCACCTG GTGGATCCGT CAGGCCATCA CCCGCGCCAT CGCCGACCAG
GCCCGAACCA TCCGGATCCC GGTCCATATG ATCGAGACCA TCAACAAGTT GATCCGCACC
AGTCGCCAGC TGGTGCAGGA AAATGGCCGC GAACCGTCGC CGGAAGAGAT TGCCGACCGG
ATGCAGCTGC CGCTGGACAA GGTGCGCAAG GTGCTGAAGA TCGCCAAGGA GCCGATCTCG
CTGGAAACCC CGATCGGTGA AGAAGAGGAT TCGCACCTGG GTGATTTCAT TGAAGACAAG
GGAGTGGTCA ACCCCCTTGA GGCGGTGATC AAGGCCAACC TGTCCGAGCA GACCTCCCGC
GTGCTTTCAA CCCTGACCCC CCGGGAGGAA AAGGTGTTGC GGATGCGTTT CGGCATTGGC
GAAAAAAGCG ACCACACCCT GGAAGAGGTG GGCCAGGACT TTGAGGTTAC CCGTGAGCGG
ATTCGTCAGA TCGAGGCCAA GGCACTGCGC AAACTGCGCC ACCCCAGCCG CAGTAAAAAA
CTGAAAAGCT TTGTAGAGTA A
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| Protein sequence | MAKKNIDEVK QLIDIGKEKG FLTFDEVNDI LPPDIATEQI DDVMGMFGDM DIEIVDSAQK
VKIPKIKIDL EEGEEEAEGE AEEVEFEPGA IGRTSDPVRM YLREMGSVSL LTREGEVEIA
KRIEDGDREV AGIILNTPIT VKEVLALGEK LRKFQITPSE ISKDIEEDAD VDIEEGEEDI
QQIRLLETID AIAASEQEIN ELLTALESAK AAAKKKELEK SLKEAKEHLA ELLRSLRMKD
RHITRVADRL KELSSKVNRV KNELAEVHNV VPPDKLAELL EKFRADEAKG MAALKPLKLS
DEDFQKVEKR LKNAARKLTK VEQESGFKAT ELSKAIRAIR EGEHKARIAK SELIEANLRL
VVSIAKKYTN RGLQFLDLIQ EGNIGLMKAV DKFEYQRGYK FSTYATWWIR QAITRAIADQ
ARTIRIPVHM IETINKLIRT SRQLVQENGR EPSPEEIADR MQLPLDKVRK VLKIAKEPIS
LETPIGEEED SHLGDFIEDK GVVNPLEAVI KANLSEQTSR VLSTLTPREE KVLRMRFGIG
EKSDHTLEEV GQDFEVTRER IRQIEAKALR KLRHPSRSKK LKSFVE
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