| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0835 |
|---|
| Symbol | |
|---|
| ID | 6369082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 855943 |
|---|
| End bp | 857076 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642676231 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001951080 |
|---|
| Protein GI | 189423903 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03235] cysteine desulfurase DndA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.723233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTT ATCTGGACTG CAACGCGACA ACGCCGGTGG AACCGTCAGT AGCATCGGTG
GTGATGCGAC TCCTGGAAAA GGATTTTGGC AATGCTGCGA GTCCTATCCA TGATTACGGT
GTGTTTGCGC TTGCCGCAGT GGAACATGCC CGGGGGCAGG TAGCCGAAGT GGTGAAGGCA
CGCCGCGATG AAGTGATTTT TACCAGCGGC GCGACGGAGA GTAACAACCT GGCAATACTT
GGGCTTGCAG GGGAAGGTGT CCGGAGTGGC CGCCGTCATC TGATTACCAC TGCCATAGAG
CACAAGGCGG TGCTTGAACC GTTTGACGAG ATGACGCGTC TGGGCTTCGA GGTGCAGATT
CTGCCGGTCA GGGGGGATGG CCGTTTTGAT CCACAGCGAT TGGCGGATGT ACTTCGTCCC
GACACGCTTC TGGTTTCCAC CATGCAGGTC AACAACGAGA CCGGGATACT GCAACCGCTG
ACAGATGTGA CAGATATTTT GTCCAACCAT AATGCATGGT GGCATGTCGA TGCCGCCCAG
GGTTTCGGCA AGGAGTTGGA GCAGCTCCGG AACCCGCGCA TCGATCTCAT CTCCATAAGC
GGCCATAAGA TATACGGTCC CAAAGGTATA GGTGCCCTCA TTGCCCGCAA GCATGATCGT
GAATTCCCGC CACTCCGTCC ACTCATGTTC GGCGGTGGGC AGGAGCAGGG ACTGCGCCCT
GGCACTCTAC CGGTCCCACT CATTGCCGGT CTTGGGGAGG CAGCAAAACT TGCCGTACGA
AACAACTGTG AACGGGGGGA GAAATGCCGG GCATTTCGCG AACAGGCTCT GGCAGTGTTT
TCGGAGCTTG GCGCACAGAT GAACGGCGCA GAAGAGTACA CGCTGCCGCA TGTACTCAAT
GTGTCGCTGC CAGGAATCAA TTCGGATCTG GCAATCAAGG CTCTTAAGAA TGTCATTGCC
GTATCCAGCA CCTCGGCATG CACCTCACAC ACTCACACGC CAAGCCATGT ACTGGTAGCA
ATGGGGTTAT CGCCTGAAAA AGTGGAACAA TCAATCCGCT TGTCGTGGTG TCACATGACC
CCGGATGTTG ACTGGTCTGA AGTTGAAAAT ATTCTCCGTG TACTGCGCGG ATAA
|
|---|
| Protein sequence | MAIYLDCNAT TPVEPSVASV VMRLLEKDFG NAASPIHDYG VFALAAVEHA RGQVAEVVKA
RRDEVIFTSG ATESNNLAIL GLAGEGVRSG RRHLITTAIE HKAVLEPFDE MTRLGFEVQI
LPVRGDGRFD PQRLADVLRP DTLLVSTMQV NNETGILQPL TDVTDILSNH NAWWHVDAAQ
GFGKELEQLR NPRIDLISIS GHKIYGPKGI GALIARKHDR EFPPLRPLMF GGGQEQGLRP
GTLPVPLIAG LGEAAKLAVR NNCERGEKCR AFREQALAVF SELGAQMNGA EEYTLPHVLN
VSLPGINSDL AIKALKNVIA VSSTSACTSH THTPSHVLVA MGLSPEKVEQ SIRLSWCHMT
PDVDWSEVEN ILRVLRG
|
|---|
| |