| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0716 |
|---|
| Symbol | |
|---|
| ID | 6369438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 732213 |
|---|
| End bp | 734687 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642676108 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001950962 |
|---|
| Protein GI | 189423785 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC GTCCGTTTTT GCTGCTGCAG ATATTGTTAC TCTGCACCCT GCTGGTACAG
GGGGGCTGTT CATCATCTTC TTCATCCTCC AGCAGCACGC CCCAGACCAT ATCGATCGGT
GTCCTGGCGC CGCTCACCGG CAGCCTGAAA CATATCGGGG AAGGGATGCA GGCGGCACTT
ACGGTCGGCC TGCCCCAGGT AAACCGGCGG CTTACTCTGG AAGGGCAGAA TTTCAGGCTC
ACAACCGTGG TGAAAGATAC GGCCTCCGAT CCGCAAGGGG CTTTGCTGGC CCTGTTGGCG
CTCAAGGCCC AGGGGATCAG GTTTGTCATC GGTCCCGTCA GCAGTGCCGA GTGTGCGGCG
ATCCTGCCGA TGGCAAACTC GCTGGGCATG ATCCTGATAA GTCCGGCCAG TACCGCAACC
TCGCTGGCCA TCGCCGGTGA TAACCTGTTC CGGCTGATGC CCAACGACAA CAGCCAGGGG
GCCGGTACAG CCGCCTTGAT GTTGAAAAAG GGATTCACGG CAATGGTTCC GGTCTGGCGC
GGCGATGTCT GGGGTGATGA CCTCAAGACA AGCATCACCA CCGCCTTCCA GACCGGCGGT
GGCACGGTAT TGAGCGGTGT CCGTTATGCT CCCGGCGCCG GCGCGTATGA CTCGGAGCTT
GATCAGGCAG CCGCCCAGGT TTCACAGGCA TTAACCACCC ATGGAGCCGG CAAGGTGGCG
GTGGTGATGA TTTCCTATCC GACCGACTCG GTTGCCCTGC TGAACGCTGC AGCAAGCAGG
CCGTCGCTGG CACAAGCCGC TTGGTTCGGC AGCGATGCCT CAACCCTCTC CCCCCTGATT
ACCGCTTCAG CCACCGCCTC CGCCTTTGCG GCGCAGACCA ACCTGCTGTC TCCGATCTTC
AGCAGGGAAG ATGTGGTGCT GCCTTTGCCG GGCACCGTAC TGATCGACCG CGCACTGCGC
GAAAAGCTTT CGCAACAGCT CGGCCGTCAG GCCGACAGCA CCACCTTCGC CACCTGGGAT
GCGTTGTGGC TGACCGCCAA GACCTACACC GCCAGCGGTA TCAATGCCGA TACCGAAACA
CTGAAAACAG GGCTGGTCGC TACTGCAAAG AGCAACGTCG GGCTGAACGG CGCATTGGTA
ATGAATGCGG CAGGCGACAT GAACAAAGGT AACTATGCCT TCTACAGCAT CGCGGCAAAC
GGCAGCAGCT ATGCCTGGCA ACTCAAGGCC GCCTATCAGT ACGAACAGCA GGCAACCCCG
AAGATTATCG ATGTCTCAGA GCCGGTTCTG AAGGGGCTCA CCCCTCCCGC GGCAGAGGTC
AGGATCGGCG CCCTGCTGAG TCTGACCGGC AGCCAATCCT ACAATGGCCG CTCAATCAGG
GCCGGCCTGG TGGCAGCATG TGACAACATC AACACCTACC TCACCCGGCA CGGCTATCCG
GTCAAGATAG CGCTGGACAT TATCGACACC GGCTCCGATG CCGACCAGGC ATTGGCCGGT
TTTACGACAC TGGCTGATCG CGGGATCAGG TTCATTGTCG GTCCGGTGAC CAGCGCTGAG
TGCCAGCGGG TGCTATCGGC AGCCAACAGC CGCGGTGTCA TCCTGCTCAG TCCGTCAAGT
AATGCCATCC AGCTGGCACA ACCCGGCGAC AACCTGATCC GTTTTGTACC GAGCGCAACG
CTTGAGGCCC AGGCCCTGGC CATGCTCTTG TATGAACAGG GGGTGCGCTC CCTGGCAATC
ATGGCCCGCA ACGACATCTG GGGAACGGAT CTGGCAAGCC GTACCGCCAG TGAATTTCAG
GCGCTGGGCG GAACGATCAT GACCAGCGTC ACCTATCCGA CGGACACCGT CAATTTTGCC
GGCCAGCTGG CCACCCTTGC CGGTGCCCTG AACTCGGCTA CACCGGCAAG TACCGCAGTG
TTGACCGCCT CCTTTGATGA AATCACCGAG ATCTTTCTCC AGGCCCCCGC GTACCCCTCC
CTTGCCACGG TAAAGTGGTA CGGCAGCGAC GGATCGGCCC AGAATGAACG GCTTGCAGCA
ACCCCTGCAG CAGCAGCCTA TGCTGCGGCA CGCAGCTTCA CCTGCCCGAT CGAGCATGTC
TTTATCCAGC ACGCGCCCCA GCCGAACTCG ATTACAAAGC TGGTTATCCG GGACGACATC
CGGGAGGCCT ATAACGGTAT CCCCGCGCTT TACGCCTACC CGGCCTGGGA TGCCCTCTGG
ATCATCGTAA CGGCGTTGCT CGACAGTGAA TGGTCAACCG ACCCGACGGT GCTGCGAAGC
GCTGTCCTGA GCGGGTCGGA CCACTACATC GGCATGAGCA ACTTCATGGG GCTGGATGCA
AACGGTGACA GAAAATACGG TGACTATGCC TTTTTCACCC TGACGCAGGG CACTGCCGCC
TATAGCTGGA ACCCTTTTGC AACCTTCCAT TACCATCCGG TTCTCTACCT GACACCGAAA
ATAACCTATC CTTAG
|
|---|
| Protein sequence | MKIRPFLLLQ ILLLCTLLVQ GGCSSSSSSS SSTPQTISIG VLAPLTGSLK HIGEGMQAAL
TVGLPQVNRR LTLEGQNFRL TTVVKDTASD PQGALLALLA LKAQGIRFVI GPVSSAECAA
ILPMANSLGM ILISPASTAT SLAIAGDNLF RLMPNDNSQG AGTAALMLKK GFTAMVPVWR
GDVWGDDLKT SITTAFQTGG GTVLSGVRYA PGAGAYDSEL DQAAAQVSQA LTTHGAGKVA
VVMISYPTDS VALLNAAASR PSLAQAAWFG SDASTLSPLI TASATASAFA AQTNLLSPIF
SREDVVLPLP GTVLIDRALR EKLSQQLGRQ ADSTTFATWD ALWLTAKTYT ASGINADTET
LKTGLVATAK SNVGLNGALV MNAAGDMNKG NYAFYSIAAN GSSYAWQLKA AYQYEQQATP
KIIDVSEPVL KGLTPPAAEV RIGALLSLTG SQSYNGRSIR AGLVAACDNI NTYLTRHGYP
VKIALDIIDT GSDADQALAG FTTLADRGIR FIVGPVTSAE CQRVLSAANS RGVILLSPSS
NAIQLAQPGD NLIRFVPSAT LEAQALAMLL YEQGVRSLAI MARNDIWGTD LASRTASEFQ
ALGGTIMTSV TYPTDTVNFA GQLATLAGAL NSATPASTAV LTASFDEITE IFLQAPAYPS
LATVKWYGSD GSAQNERLAA TPAAAAYAAA RSFTCPIEHV FIQHAPQPNS ITKLVIRDDI
REAYNGIPAL YAYPAWDALW IIVTALLDSE WSTDPTVLRS AVLSGSDHYI GMSNFMGLDA
NGDRKYGDYA FFTLTQGTAA YSWNPFATFH YHPVLYLTPK ITYP
|
|---|
| |