| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0707 |
|---|
| Symbol | |
|---|
| ID | 6369426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 721496 |
|---|
| End bp | 722503 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642676099 |
|---|
| Product | Auxin Efflux Carrier |
|---|
| Protein accession | YP_001950953 |
|---|
| Protein GI | 189423776 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCAG CAGCCACCGT CATTATCAGC AGTGGTGCCA CCGCAGCACA GTTCCTTTCC
CTGCGGATCC TGGCAACCGC CATCATCATC ATCGTGGCCG GGGCCTTAAT GGCCAAATGG
GAAGGGGGAG GGCAACAGAA TACCCTGGCC CGTCTGAACA GCCAGATCTT TATCCCCTGC
CTGATCTTTG CAGCGATGAA CCGCACCCCG CTGGCGCTAT CTGAAGCGCT GATCATGGGG
GCCGGAGCCC TGTTTTTCTC CCTCTGTTCC TACCCGCTGG CCCACTGGTG GGTTGCACGG
GACCCGGAGG GTGACCGGAA CGGTTTTATC TCAATGATGT TCGGCAGCAC CAGCACCATA
CTGCTGCCGC TGGCCTATCT GCTCTTTGGC AGCCAGGGGC TGGCCAAGGC CGCCTTCTTC
CACCTGGTAA ACCTGTTTCT GATCTATACC TGGGGCCGCT GGCGCGCCGG GCACCCTCCC
CAGCTGGTTG CCTTCCTGAA GACACCGACC CTGCATGCCG TGCTGCTGGC TCTGGTATTG
AAACTGTTTG AACTGGAGCT TCCGGGGCAA CTGCAGGACC TGCTCTGGCT GGTGGAAAAG
GGGATCGGCA TGATGGCGAG CGGAGCCCTG CCGATTCTGC TGATCAGCCA CGGCTATGCC
CTCTACTGCC TGCGAAGCTC CGGCGCAACC TGGTGGTCCG GCGCAGCGTT GATCCGCATG
CTCTGGCTGC CGCTGGTGGC AATCGTGCTG ATTCTGATTC TGCGGGTAAT CGGGCTGGCA
CCGCTGGAGA AGGGGTATGA CCTGATGCAC TACCTTGACC TGCGCACCAC CGAGGCAATC
CTGCTGCTTG CCTCTGCCCT GCCCTGCACC ATTTCCGCCT TCTGGCGGCC TGGCGACAGC
CCACTCTCCA ACCGGGATTC GTCTTTGCTG CTCTCATCAG CGCTTTTGTC GATACCCGCC
TTTGGCCTGC TGGTCTCTAT CATTAACCGT TATATTTTTA ACTCCTGA
|
|---|
| Protein sequence | MGAAATVIIS SGATAAQFLS LRILATAIII IVAGALMAKW EGGGQQNTLA RLNSQIFIPC
LIFAAMNRTP LALSEALIMG AGALFFSLCS YPLAHWWVAR DPEGDRNGFI SMMFGSTSTI
LLPLAYLLFG SQGLAKAAFF HLVNLFLIYT WGRWRAGHPP QLVAFLKTPT LHAVLLALVL
KLFELELPGQ LQDLLWLVEK GIGMMASGAL PILLISHGYA LYCLRSSGAT WWSGAALIRM
LWLPLVAIVL ILILRVIGLA PLEKGYDLMH YLDLRTTEAI LLLASALPCT ISAFWRPGDS
PLSNRDSSLL LSSALLSIPA FGLLVSIINR YIFNS
|
|---|
| |