Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0599 |
Symbol | |
ID | 6368035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 589223 |
End bp | 592096 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642675991 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001950846 |
Protein GI | 189423669 |
COG category | [E] Amino acid transport and metabolism [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA GCATCTGTAC CATAGCATTC CTGCTGCTGT TGTTCTGTCT GCAGACCGCC TCACCGGCGC TTGCCGTCCC CCCGTCCCCT GTAAACAGGC CATTGATTGC CGTCATCCCC ACCGATCTTG CCCCTTACTA CTTCCGGGAA CCGGTCACCG CCAAACCTGC CGGACTGGCC GTTGATATCA CCGATGCCCT GGCCCGCCGG GCCGGGCTGC AGGTTGAATA CCGTTTTGCC AAGGCCTGGG AAGAGATTGA CGAGCTGGTC TTAAACCGGC AGGCCGACCT GATTCCGTTG CGGGTGATCA ACCAAACCAC CAAAGACCAG TTCCTGTTCA GCGAAGTCCT CGACGTCGCC CCGATCAGCT ATCTGGTCAG GGCAAGCGAT ACACGCACCA AAGGAGTTGC CCCCGGCCAA CGGGTCGGCG TGATGCAGAA CAGTACCGCC TACAGCCTGC TGAAAGACCG CAGCGACATC ACCCTGACAA CCTATGAAAG CCTGCAGCAG CTGTTGATGG ATCTGGTAAC CGGTCAGCTG GATCTGGTCA TGACCTTCAG AAACACCATT GTGCAGCTGG CAGAAAAGGC CGGTCTGGAA AACCAGATCC GGGTCATTGA ACCGCCGGCG CTTGAATCGC GGCGGGGCAT CGCCCTGCAT CCCGCCAATA CCGCTCTTGC GCAGCAGCTG AACGCCGCCA TCAAGACCTT CCATGGTTCC CGGGAATACC AGAAGATCTA TCAGCACTGG ATGGGCACGC CCAAACCATG GTGGACGGTG CAACGCACCG TGCTGTTGAT GGGCGGCGGC ACCGTTCTGC TGCTGGCCGG ATCGCTGCTC TGGCGTTTTT TGGGCATCCG CAGGCTGAAC CGGCAGCTGC AGGAGGCAAA CCAACGCCTG GAAACCGAGA TCAGCGAACA TAACCAGGCT GTCCGGCTGC TCAAAAAGAA TGAACAGTTT CAAAAGACCC TGATTGAGAC CCTGCCAGAC CTGGTCTGGC TGAAGGATCC TGACGGGGTC TATCTGGGCT GTAACCCGCG TTTTGAAGAG CTCTACGGGG CAAAGCAGTC TGAAATCATC GGTAAGACCG ATTACGACTT TGTTGAGCGG GAGCTGGCCG ATTTCTTCAG GGAGAACGAC CGCAAGGCGG CGGCAGCCGG CAAACCGACC GTCAACGAAG AGTGGCTGAC CTTTACGGAA AGCGGTTACC GAGGTCTGTT TGAGACCATC AAGACCCCGA TGTTCGACAC GGACGGCACG TTGCTGGGGG TGCTGGGGGT TGCCCGCGAC ATCTCGGAAC GGGCCAGGGC CTATGAGCTG CTGCGGCTCT CCGAAGAAAA ATTCGCCACC GCGTTCCGGG TCTCTCCCGA CTCAGTCAAT CTGAACAGGC TGTCCGACGG CACCTATCTG GAAGTCAATG AGGGCTTCAC CGCCATCGCC GGCTATCAAC CGGAGGAGGT GCTGGGTAAA TCATCCCTTG AGCTGAATAT CTGGGCGAAT CCCGCTGATC GTCTGCAGCT GGTGCAGGAG CTTCAGCAGC ACGGCTTTGT CAGAAACCTG GAGGCACAGT TCCGCTGCAA GGACGGCTCA CTCATCACCG GCCAGATGTC GGCCCGGATC ATTACCGTCA ACGGTGAGCA GTGTCTGCTC AACATCACCC GTGATATCAG TGAACGGAAA AGATATGAAG AGGAACTGCA GCAGGCCCGT CAGGCGGCCG AGGCGGCCAA CCGGGCCAAG AGCGAGTTTC TGGCCAACAT GAGCCATGAG ATCCGCACCC CCATGAACGG GGTGATCGGG ATGGTGCAAC TGCTGCAGTT TACCCGGCTG AACAGCGAAC AGCAGGAGTA TCTGCAGTGC CTCGAAACCT CCGCTCAGAA CCTGCTGTCG CTGCTGAACG ACATCCTGGA CCTGTCCAAG ATCGAGGCCG GCAAGATTTC CCTTGAGTAC GCCGATTTCT CCCTGCGTCA CAGCATTCAG GAGGTGGTGA CCACCCAGAT CTCCCAGATT CATCAAAAAC GGCTGAAACT GACAACCAGC CTGGCGGATG ATATCCCCGA GATCCTGCAC GGCGATCCAC TCCGCCTTAA ACAGATCCTG CTCAACCTGC TGGGTAATGC CATCAAATTT ACCGCAGCCG GCAGCATTAC CATCGCGGCC CGGATCACAG ACCAACAGAA CGGGACGCTG ACCATCTGCC TCAGTGTCAG CGACACCGGC ATCGGCATGA CGCCTGAGGC GCTGCAACGG ATCTTTGCCC CCTTTGAACA GGCCGACAAC TCCACCACCC GCAGATTCGG CGGCACCGGG CTGGGACTGA CCATCTGCCG CCGCCTGGCA GAACTGATGG GGGGACGGAT CTGGGCCGAA TCGTCGGACG GGCACGGCAG CAGTTTCTTT GTGGAATTGC CCTTTGCGGT CCGGATGCAG ACCGCACCTG CGGCAGCACC TGCTGTGCTG CAGAGCGCTA CAGGCAGCAC CCGCAGCCTG CAGTTGCTGC TGGCAGAGGA CAACGCCCCC AACGCCGCCA CGATTACTGC CATGCTGAAA CGGATGGGGC ATCAGGTTGA GGTGGTCAAC GACGGCAAAC AGGCACTGGA CAGGTGGCGC TGCAACCGTT ACGACGCCCT GTTGCTGGAT GTCTCCATGC CGGTCATGGG GGGCAGCGAG GCGACCCGGC TGATTCGTGA GGAAGAACAG CAGACCGGCC AACATATCCC GATCATCGCC GTTACCGCCC ATGCCCTGCG GGGGGACCGC GACCTGTTCC TGCAGAACGG TTTTGACGGC TATGTCGCCA AACCGGTCGA TATGCAGCAT CTGGCACGGG AACTGGAACG GCTGACCACG CGCCGGTCGT CACCTAATAT TTGA
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Protein sequence | MKRSICTIAF LLLLFCLQTA SPALAVPPSP VNRPLIAVIP TDLAPYYFRE PVTAKPAGLA VDITDALARR AGLQVEYRFA KAWEEIDELV LNRQADLIPL RVINQTTKDQ FLFSEVLDVA PISYLVRASD TRTKGVAPGQ RVGVMQNSTA YSLLKDRSDI TLTTYESLQQ LLMDLVTGQL DLVMTFRNTI VQLAEKAGLE NQIRVIEPPA LESRRGIALH PANTALAQQL NAAIKTFHGS REYQKIYQHW MGTPKPWWTV QRTVLLMGGG TVLLLAGSLL WRFLGIRRLN RQLQEANQRL ETEISEHNQA VRLLKKNEQF QKTLIETLPD LVWLKDPDGV YLGCNPRFEE LYGAKQSEII GKTDYDFVER ELADFFREND RKAAAAGKPT VNEEWLTFTE SGYRGLFETI KTPMFDTDGT LLGVLGVARD ISERARAYEL LRLSEEKFAT AFRVSPDSVN LNRLSDGTYL EVNEGFTAIA GYQPEEVLGK SSLELNIWAN PADRLQLVQE LQQHGFVRNL EAQFRCKDGS LITGQMSARI ITVNGEQCLL NITRDISERK RYEEELQQAR QAAEAANRAK SEFLANMSHE IRTPMNGVIG MVQLLQFTRL NSEQQEYLQC LETSAQNLLS LLNDILDLSK IEAGKISLEY ADFSLRHSIQ EVVTTQISQI HQKRLKLTTS LADDIPEILH GDPLRLKQIL LNLLGNAIKF TAAGSITIAA RITDQQNGTL TICLSVSDTG IGMTPEALQR IFAPFEQADN STTRRFGGTG LGLTICRRLA ELMGGRIWAE SSDGHGSSFF VELPFAVRMQ TAPAAAPAVL QSATGSTRSL QLLLAEDNAP NAATITAMLK RMGHQVEVVN DGKQALDRWR CNRYDALLLD VSMPVMGGSE ATRLIREEEQ QTGQHIPIIA VTAHALRGDR DLFLQNGFDG YVAKPVDMQH LARELERLTT RRSSPNI
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