| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0560 |
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| Symbol | |
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| ID | 6367749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 531883 |
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| End bp | 534705 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642675953 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001950808 |
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| Protein GI | 189423631 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACC GGATCCGCAG TCTAGCGTTA CCGTTATTGA CCGTCCTGCT GGTACTGCTG
CTGGTCTGCG CAGCGGAGAA ACCGGCCGGC GCAGTTCCGG CAGGGCTTGC CCTGAGCGAT
GCCGAGAAGA GCTGGCTGGC CAGACACCCG ATCATCCATG TCGGGGTAAT GCAGGACTGG
CCACCCATGA ACTATCTTGA TCGTAACGGC ACGGTGCAGG GGATCGGCGC CGACTACCTC
AAGACGATCA ACCGCATGCT GGGGGGGATG CTGGTCCCGG TCCCCGGTCC GTTCAGGGAT
AACTACGAAT GGCTGCAAAA GGGGCAGATT GATGCTCTGA TGGATATCAC CCGCACACCG
GAACGGGATG CGCTGTTCGA TTTTACCCGG CCCTATATCT CTATCCCCCA TGTGCTGGTA
GGGCGCAAGT CGGGCGGTTT TTACCGGCAG GAAAGCGACC TGACCGGCAA GCGCATCGCC
CTTGAAAAGG GCTTTAACAA TGTCACCTAC TTCAGGAACA ATTTTCCGGC GGTTACGGTC
CGCGAGTACG GCAGCACCGC CGAAGCGCTG AAGGCGGTTG CCCGGGGGGA AGCCGACGCC
TATGCCGGTA ACCGTGCCGT GGTGCAGCAT CTGCTTGAGA AACTGGAGCT GAACGGGTTG
ATGCCGATGG GCACCCTGAT CGCGCCCCGC TCGGTACTGC AGTTCGGGGT GGCCAAGGGA
CAGACGGAGC TGCTGGGCAT TCTGGATAAG GCGCTGGCCG CGATTCCGGC CGGGGAGCGG
TCGGCAATTG CCGACCGCTG GATCCCGAAT CCCTATGAGA CGCGGATTGA CTATCGCAAG
CTGCTGCTGG CTGCCTTGCT GGTGATTACG CTGCTGGCAG GCCTGGTACT GGTCACCCGG
CGCCTGAATA AACGGTTGCA GCAGCAGCAG GACTACTGGC AGGCCCTGTT TGAGCATAAC
GGTACCGGTA ACCTGATTGT CTCCTCAGAA CGTCTGATGT TGAAGGTCAA TCAGCAGTTC
TGTGACCTGT TCGGTTACCG GGAGGAGGAG CTGATCGGTC AGTCCGTGCG GTTGCTGCAC
CTTGATCAGC AGCATTATGA AGGCTGGGCC CCCACCTTCA TGAGCGTGCG TGACGGCAAG
ACCCACCTGA GTGCGGAATA TCCCATGCGC CACAAGGACG GCAGTCTTTT CTGGTGCCTT
TTTACCGGGG TCCGGCTGCA GTTGCCAGAC GGCCAGCGCG GGGTGGTCTG GAGCGCCATT
GATATCACGG AGCGCAAACA GGCCGAGCAG ACCATGGCCC TGCTCAATTT TGCCCTGGAT
ACGATCCATG AAGCAGCCTA TCTGGTGGAT GAAACCACCC GCTTTATTTT TGTCAATCAG
GAGGCCTGCC GCTCCACCGG GTACAGTCGC GAAGAGCTGC TGACAATGAA GATCGGCGAT
GTCGATGCGG AGTTTCCCGA GGATCAGTGG CCTGTCTTCT GGCAGGAGCT GATCCGGCGT
CGGGCCATCA CCTTTGAAGG CATGCATAAA GATTGTTCCG GCCGGACCTA TCCGGTGGAG
ATTACCGCCA ACTATTTTGA GTTTGACGGC CAGGGCTACA ACCTGGGATT GGCCCGGGAT
ATCAGTGAAC GGAAAAAGAC AGAGGCTGTG TTGCAGGAGG CGAAGGAGCG GGCAGAGGCC
GCCAGCCGGG CCAAGACGGA GTTTCTGGCC AACATGAGCC ACGAGATCCG CACCCCGATG
AACGGTATCA TCAGCATGGC CCATCTGCTG CGGATGACGG AGCTGACTTC CGAACAACAG
GAATATCTGG CCAGTCTGCA GATCTCGTCC AAAAATCTGT TGGCGCTGAT CAGCGACATT
CTGGATATCT CCAAAATCGA GGCCGGTAAA CTTGAGCTGG AATACGCAGA CTTTTCAGTG
CGGGCTACCA TTGAAGAGGT CGTGGCCTCG CAGATGCCGC GCATCACCCA GAAACGTCTG
GATATCTGTA CCGAACTGTC TGACGGACTC CCCGAGATCC TGCTGGGAGA CTCACTGCGG
TTCAAGCAGA TCCTGCTGAA TCTGCTGGGC AATGCCATCA AGTTTACAGA ACAGGGCGGC
ATCAGTATTG TGGCCAAGCC GTCTGCCCGT CATGACAATC AGCTGATCAT GCGTATCATG
ATTGCCGATA CCGGTATCGG CATGTCTCCA GAGGTGCTGG AGCGGGTCTT TAGCCCCTTT
GAACAGGCGG ACAGCTCTAC GACCCGTAAA TATGGCGGCA CCGGCCTGGG GCTTTCCATC
TGCCGCCGTC TGGTGGAGCT GATGGGGGGA CGGATCTGGG CTGCCAGCAG ACCCGGCAGT
GGCAGTACTT TCTTTGTCGA GCTGCCGTTT GTGGTACGCG AGGCCCCTGC CGGTACCGCT
CTGCGTCTGG AATGCCGCCC GGAGCCGGTG CCGGAGGGAC GCCCGTTGGT TGTGCTGCTG
GCGGAAGATA ATCAGATCAA TGCCCGCAGT ATGAGTGCCA TCCTGACCCG TTCCGGGCAT
CGGGTCGTAA CCGTGGACGA TGGGCAAAAG GCCTTTGAAC AGTGGCACAG CAACCGTTGG
GACTGTATCC TGATGGATGT TCAGATGCCG GTCATGGATG GTGTTGAGGC CACCCGTCTG
ATCCGTCAGG CTGAACAGGC GTCGGGCAGC CACACCCCGG TTATTGCCCT GACCGCCCAT
GCCATGCAGG GTGACCGGGA ATGGCTGATG GCCGAGGGGT TTGACGGCTA TGTGGCCAAA
CCGGTGGATG TTGAGCAGCT TTTCAGGGAG ATTGAGCAGG TAACCGGAGG GGGACGGTCA
TGA
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| Protein sequence | MKNRIRSLAL PLLTVLLVLL LVCAAEKPAG AVPAGLALSD AEKSWLARHP IIHVGVMQDW
PPMNYLDRNG TVQGIGADYL KTINRMLGGM LVPVPGPFRD NYEWLQKGQI DALMDITRTP
ERDALFDFTR PYISIPHVLV GRKSGGFYRQ ESDLTGKRIA LEKGFNNVTY FRNNFPAVTV
REYGSTAEAL KAVARGEADA YAGNRAVVQH LLEKLELNGL MPMGTLIAPR SVLQFGVAKG
QTELLGILDK ALAAIPAGER SAIADRWIPN PYETRIDYRK LLLAALLVIT LLAGLVLVTR
RLNKRLQQQQ DYWQALFEHN GTGNLIVSSE RLMLKVNQQF CDLFGYREEE LIGQSVRLLH
LDQQHYEGWA PTFMSVRDGK THLSAEYPMR HKDGSLFWCL FTGVRLQLPD GQRGVVWSAI
DITERKQAEQ TMALLNFALD TIHEAAYLVD ETTRFIFVNQ EACRSTGYSR EELLTMKIGD
VDAEFPEDQW PVFWQELIRR RAITFEGMHK DCSGRTYPVE ITANYFEFDG QGYNLGLARD
ISERKKTEAV LQEAKERAEA ASRAKTEFLA NMSHEIRTPM NGIISMAHLL RMTELTSEQQ
EYLASLQISS KNLLALISDI LDISKIEAGK LELEYADFSV RATIEEVVAS QMPRITQKRL
DICTELSDGL PEILLGDSLR FKQILLNLLG NAIKFTEQGG ISIVAKPSAR HDNQLIMRIM
IADTGIGMSP EVLERVFSPF EQADSSTTRK YGGTGLGLSI CRRLVELMGG RIWAASRPGS
GSTFFVELPF VVREAPAGTA LRLECRPEPV PEGRPLVVLL AEDNQINARS MSAILTRSGH
RVVTVDDGQK AFEQWHSNRW DCILMDVQMP VMDGVEATRL IRQAEQASGS HTPVIALTAH
AMQGDREWLM AEGFDGYVAK PVDVEQLFRE IEQVTGGGRS
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