| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0395 |
|---|
| Symbol | |
|---|
| ID | 6366094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 372488 |
|---|
| End bp | 373882 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642675787 |
|---|
| Product | RND efflux system, outer membrane lipoprotein, NodT family |
|---|
| Protein accession | YP_001950643 |
|---|
| Protein GI | 189423466 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC TGTCCATCGT TACCTACGCC TTTGTTCTGC CGATCTGTTG TTTCCTTGCG
GGGTGCAGCG GCCTGCTTCC GCGCAGCCAG TATACCCGGC CGGAGGTGAC GCTCCCTCGG
CAATGGCAAG CAACCGGCGT AACCGGTTCA GCTGTTGCAA CAAAAAGACA GTGGTGGCGG
GACTACAATG ATCAGACCTT GAGCGAGCTG ATCGAGCTGG CACTCAGATC CAACAACAAC
CTTGCAGCGG CCACGATCAA GGTAAAGCGG GCACAGCTTT CGGCCAGACT TACCAACACC
AATCTGACTC CGACGGTTTC TGCCGATCTC AGCAGCAGCC TGAGCCGTGA CCTCACTACC
CGCAGTGAGA CCAAGTCGAG CGGGGCCACA CTCTCGGCAA GCTATGAGCT GGATCTGTGG
GGGAAGCTGG CCAGCGCCCG TGACGCCAGC AAGTGGGAGG CCGAAGCAAC CGAGTATGAT
CGCCAGAGTA CCGCGTTGGC GCTGGTTGGC ACAGTCGCAA CGAACTACTG GACCATCGCC
TACCTGAATG AACGGATCGC CTCGGTTGAC GCAAGTATTC TCAATGCCGA AAGAGTCCTG
GGGCTGGTGG AGGTGAAATA TCAGGCAGGA GCCGTTTCCG CATTGGATAA GCTGCAGGCA
CAACAGACCG TTGCCAGCCA GAAGGCGCAG CTGACTGAAC TTTGGCAACA GCGGACTGAA
GCGCGTAATG CCCTGGCGAT TCTGTTCAAC CAGGCACCGG AGCATACCGT GCCGGAACGC
CAGCGCCTGC CGGAGGGTGC ATTGCCGCAG GTGCAGGCCG GTCTCCCTGC CAGCCTGCTC
GGCCAACGGC CTGATCTGCA GGCTGCCGAG CAGAGACTGA AAAAATACCT GGCGAATGTT
GACACTACCC GCGCCAGCTA CTATCCCAGT TTTACCCTGA CCGGGACGCT TGGCAGAAGC
AGCACCAGCC TGGTTGAGGT CGTCAAAAAC CCCTACGCCG CATTGGGTGC GGGGCTGGTA
CTACCGTTTA TCCAATGGAA TACGATGAGG TTGCATGTTG AAACCGCACA AGCGGATTAT
GAGGAGGCAG TGGTAAACTT CAGGCAGACA CTCTACGCAG CGCTCAGTGA TGTCGAGAAT
GCCCTGGCTG CACGCAAGAA TTACGCAGAA GAGCTCAAGC AGCTGCAAGA CTCCCTCGAC
CTGGCCAAAA AGGCGGAACA GCTGGCAGAG GTCCGTTATC TGACAGGCTC TACCGATCTG
CAGACCTGGC TGGATACTCA GGAACGCCGC AGAGATGCCG AACGGGCATT CGCGGTGGTC
CGGTTGGCAC AACTCAAAAA CAGCATGGCG TTATATCAAG TGATTGGCGG TACCACCGCT
TTACCGGTGC CGTAA
|
|---|
| Protein sequence | MKILSIVTYA FVLPICCFLA GCSGLLPRSQ YTRPEVTLPR QWQATGVTGS AVATKRQWWR
DYNDQTLSEL IELALRSNNN LAAATIKVKR AQLSARLTNT NLTPTVSADL SSSLSRDLTT
RSETKSSGAT LSASYELDLW GKLASARDAS KWEAEATEYD RQSTALALVG TVATNYWTIA
YLNERIASVD ASILNAERVL GLVEVKYQAG AVSALDKLQA QQTVASQKAQ LTELWQQRTE
ARNALAILFN QAPEHTVPER QRLPEGALPQ VQAGLPASLL GQRPDLQAAE QRLKKYLANV
DTTRASYYPS FTLTGTLGRS STSLVEVVKN PYAALGAGLV LPFIQWNTMR LHVETAQADY
EEAVVNFRQT LYAALSDVEN ALAARKNYAE ELKQLQDSLD LAKKAEQLAE VRYLTGSTDL
QTWLDTQERR RDAERAFAVV RLAQLKNSMA LYQVIGGTTA LPVP
|
|---|
| |