Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0376 |
Symbol | |
ID | 6366056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 351090 |
End bp | 351767 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642675768 |
Product | HhH-GPD family protein |
Protein accession | YP_001950624 |
Protein GI | 189423447 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGATA AGCGGCTTGA CAGGATTTTC ACTACCCTGC TGGAACGGTA TGGCCCCCGG CATTGGTGGC CCGGTGAAAC CCCCTTTGAG GTCTGCGTCG GTGCTATCCT GACCCAGAAT ACCAACTGGG GCAATGTGGA AAAGGCGATT GCGAACCTGA AGGCGGCTGA CAGACTGTCC GTTACAGGCA TCGCAGACCT GTTGCCGGCT GCACTGGCAG CACTGATCAG ACCGGCAGGT TACTTTAACG TCAAGGCAGT AAGGCTACAG GCATTTACCA CCTTTTTGCA GCAACAGTAC CAGGGCAGCC TTGACCGGCT TTTTGCCGCC CCCTGGCAGC AGACCAGAAC AGAGCTGCTT GCGGTCAAGG GGATCGGGCC TGAAACCGCC GACTCGATCC TGCTCTATGC CGGTCACAAA CCAAGCTTTG TGGTGGATGC CTATACCAGA CGCATCTTCA GCCGGCTGGG GCTGGTCGAT GAGCGGATCA GCTATGACGG GTTACGACGC CACTTCATGG ATCGCCTGAC CTTGGACACA GCCCTGTTTA ACGAGTACCA TGCGCTGCTC GTCGAGCTGG GGAAGCAGGC CTGCCGTCCA AGGCCGCAAT GTAGCAGCTG TTGTCTGGCA GCCCAGTGTT CCTATAACGC AACAAAAAAC CAATCAAAAT GCTCTTAA
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Protein sequence | MADKRLDRIF TTLLERYGPR HWWPGETPFE VCVGAILTQN TNWGNVEKAI ANLKAADRLS VTGIADLLPA ALAALIRPAG YFNVKAVRLQ AFTTFLQQQY QGSLDRLFAA PWQQTRTELL AVKGIGPETA DSILLYAGHK PSFVVDAYTR RIFSRLGLVD ERISYDGLRR HFMDRLTLDT ALFNEYHALL VELGKQACRP RPQCSSCCLA AQCSYNATKN QSKCS
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