Gene Clim_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2462 
Symbol 
ID6354732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2698302 
End bp2699744 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content52% 
IMG OID642670051 
Productputative transcriptional regulator 
Protein accessionYP_001944461 
Protein GI189347932 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTG CTGATCTTGA TATCCTGCTC CAGGAGGGTG AGGGGGTGAT GCTGGAGTAC 
AAGGAGGGGA TCTCCGGATC ATTCGCCCGT GAATTGGTGG CTTTTGCCAA CACGGCAGGA
GGTCGGATTT TGCTTGGTGT GCGGGATAAC GGGACAGTGA AGGGGATTGC TGATACAAAT
GTGTTGCGGG CCAGAATTCA GGATATTGCC CGGAATTGTG ATCCTCCGGT GCAGATTCTG
TTGCAGCATA TCGGCATGGT TACAGTTGTG ACGGTTCGTG AAAGTGATGC AAAGCCGGTG
CAGTGCAGCG ATGGCTTTTT TCTGCGGCAG GGAGCTGTAA CCCAAAAGCT CTCGCGTGAG
GAGATTCGGG ATATGTTTCG GCATGGTGGG GCAGTAAGGT TCGATCTTTC TCCCTGTCCA
GCCTTCCGCT ATCCGGAGGA TTTTGATTCC GTTAAATTCA GGGAGTGGCT GCAAAAAAGT
TCTATTTCGC AGCGCAGTCC GGTGGAGGAT ATTCTTGTAA ACATTGAAGC AGCGGAGCGT
TCAGGCGGAA AACTTCTCTT TCGTAATGCC GGGGTGCTCT TTTTTGCCCG TGAGCCGAGG
CATTTTTTCA ATCAGGCTTA CGTGACCTGC CTGCTCTTCA AGGGGACAGT CAAGTTGCAT
GTTCTTGATC GCAAGGATTT TGCCGGAGGG ATTGTTGCCG ATATCGAAGA GAGCCTGCGC
TTTATTGAGC GTAATACACG CACAGCCTAC CGGATCGAGA AGCTCCAGCG CGAGGAGATT
CCGCAATATC CGGTTGCCGC CCTGCGGGAA GCTCTGACCA ATGCGGTGAT GCACCGTGAC
TGGTTTATCG AGGGAGGTAA TGTTTTTGTG GAGATATACG ATGATCGCAT TGAGGTGTCA
AGTCCCGGTA CGCTTCCGAA AGGGATGCTT CCGGAGGATC TTGGAAGCAA AAGCATTCGC
CGTAATCCAC TCATTGCCGA TCTGCTGCAT CGTATCGCAT TTATCGAGAA GGCTGGAACC
GGAATCCGGC GGATGCTGGA CGGAGCCAGG GAGATGGGAT ATCCTGAACC GGAGTTTATT
GCAGGCAACT TTTTTACCGC GCTGTTTCGT CCGATTCATG AGGCGTCAGA GCAAGGTACC
AGACATGTAC CCGACATGCA CCCGACATGT ACCGCACATG TACCGCACAT GTACCCCGCA
TGTACCCCGC AAGTGATAGC TATTCTTAGC TTGGCTGAAG GAGAAGCAAA GACACGTGAT
GTGCTGCAAG AAGTCGCAAA GATCAAAAAT CGAGAGCATT TCTATCAGCA CTACCTTCAA
CCGCTTCTTT CCGCTGGGTT ACTCGAACGC ACCGTTCCCG ATAAACCCCG AAGTCCGAAG
CAGCGATATG TTACGACCGC AGCCGGTCGC GCCATGATTG AAAAATCTGA CAAGGAGTCC
TGA
 
Protein sequence
MKAADLDILL QEGEGVMLEY KEGISGSFAR ELVAFANTAG GRILLGVRDN GTVKGIADTN 
VLRARIQDIA RNCDPPVQIL LQHIGMVTVV TVRESDAKPV QCSDGFFLRQ GAVTQKLSRE
EIRDMFRHGG AVRFDLSPCP AFRYPEDFDS VKFREWLQKS SISQRSPVED ILVNIEAAER
SGGKLLFRNA GVLFFAREPR HFFNQAYVTC LLFKGTVKLH VLDRKDFAGG IVADIEESLR
FIERNTRTAY RIEKLQREEI PQYPVAALRE ALTNAVMHRD WFIEGGNVFV EIYDDRIEVS
SPGTLPKGML PEDLGSKSIR RNPLIADLLH RIAFIEKAGT GIRRMLDGAR EMGYPEPEFI
AGNFFTALFR PIHEASEQGT RHVPDMHPTC TAHVPHMYPA CTPQVIAILS LAEGEAKTRD
VLQEVAKIKN REHFYQHYLQ PLLSAGLLER TVPDKPRSPK QRYVTTAAGR AMIEKSDKES