Gene Clim_2450 details

Gene Information

• Locus tag: Clim_2450
• ID: 6354720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2684711
• End bp: 2685226
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642670040
• Product: rare lipoprotein A
• Protein accession: YP_001944450
• Protein GI: 189347921
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0060097
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGCA AATTACTCGT TCCGATACTT CTGGCTACCG CACTGGGCCT CAACTCGTGC 
TCGACAGGCA GAGCGCCTCT CACACAGCAG GACAAGACCG GCAGACTGCT CTCTCCCGAA 
GAAGCCTACC GTTTGGGAAA ACTTAAAAAC AAGCCCTATG TGATAGATGG AAAGCTCTAT 
GTTCCGATGG ATTACAGGGA AACAGCCGGC TATCAGGAAA CCGGCATCGC CTCGTGGTAT 
GGGCAGGAAA CCCTCGATCA GCACAACAAT CAGCCGACAG CATACGGAGA AACGTTCTAT 
CCCGACAAGC CCAGTGCTGC CCACAAATAC CTGCCGCTTC CGGCAATCGT CCGCGTCACG 
AATCTTGAAA CCAATGCATC GGTAATCGTG CGCGTCAACG ACAGGGGCCC GTTTGTCGGT 
AACCGCGTAA TAGATCTGAG CGCCGAAGCC GCAAAACAGC TCGGGTTCTA CGGAAAAGGC 
ACTGCAAAAG TCAAGCTCGA AGTGGTGACG AAATAA 

 

Protein sequence

MMRKLLVPIL LATALGLNSC STGRAPLTQQ DKTGRLLSPE EAYRLGKLKN KPYVIDGKLY 
VPMDYRETAG YQETGIASWY GQETLDQHNN QPTAYGETFY PDKPSAAHKY LPLPAIVRVT 
NLETNASVIV RVNDRGPFVG NRVIDLSAEA AKQLGFYGKG TAKVKLEVVT K