Gene Clim_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2198 
SymbolcysS 
ID6355992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2438481 
End bp2439935 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content53% 
IMG OID642669789 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001944201 
Protein GI189347672 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTAC AGATCTACAA CTCTCTTTCA CGCAGCAAGG AAACATTCGA ACCGGTCCAT 
CCCGGAGTTG TCGGCATGTA TGTATGCGGA CCTACCGTTT ACGGTCATGC ACATCTCGGC
CATGCGAAAA GCTATGTTTC GTTTGACGTT GTGGCCAGAT GGCTGCGCCA GAGCGGGTAT
CGGGTGCGAT ACGTGCAGAA CATCACCGAC GTAGGGCACC TTTCCGACGA TGCCGATGAA
GGCGAAGACA AGATCGCACG CCAGGCCCGC CTCGAGAAAA CCGATCCTAT GGAAATAGCC
CAGTTCTATA CGCGCAGCTT CTATGATGAC ATGGACCGTC TGGGTGTCGA GCGGCCGAAT
ATCGCGCCAA CCGCTACCGG ACATGTGCCC GAGCAGATTG CCCTGATCAG GCAACTGGTC
GGGTCTTCTC ATGCATATGT TGTGAACGGC AACGTCTATT TTTCCGTACA ATCCTTTCCG
GACTATGGTA AACTGTCGGG CAGAACCGAT CAGGAAGCCC TTCAGTCAGG TACGCGAATT
GAGGTAAGAA ACGAAAAACG GCATCCTTCC GACTTCGCTC TCTGGAAAAA AGCCGAAGAG
GGCCATATCA TGAAGTGGGA GTCGCCGTGG GGAACCGGTT ACCCCGGGTG GCACGTCGAA
TGCTCAGCGA TGTCGATGAA ATATCTTGGA GAGACCGTCG ATATTCACGG CGGAGGCATG
GAAAACAAGT TTCCCCACCA CGACTGCGAG ATTGCCCAGT CAGAAGCTGC TACCGGCAGA
CCATATGTGC GATACTGGAT GCACAACAAC ATGGTGACCG TTGGCGGAAT AAAAATGGGC
AAGTCCCTGA AGAATTCCGT GAATCTCAAG GATCTGTTCC GCGAAACAGA TCCGATGGTC
ATCCGCTTTT TCATTCTTCA GTCCCACTAC CGCTCGCCTC TTGATTATTC GGAAGCGGCA
ATCCGGGCCT CTTCAGCGGG TCTGGAAAAA CTGCAGGATA CCCGCCAGCG TCTGCAAAAA
ACCCGGCCGG GAACCGGAAA CTTTGACAGC ACAGCTTTTA CGGAGAGATT CACTGCGGCA
ATGGATGACG ACTTCAATAC GCCGCTTGCA ATTTCAATTC TTTTTGATTT TTCAAAATCA
GTCAACAGCG CGCTTGATAA ACAGGAAGGG CTTTCAGCCG ACTCGATAGC CGAAGCTGCG
GCATTTCTCG ATACATTCGC GGGAAAGGTT CTGGGAATCG TCTCTGCCTC CGATGAGGCG
TCCGGCCATG CATCGGAAAA CAGCCGTCAG ACGCTTGAGA AGACTATTTC CATTCTGCTC
GATATGCGTA TAGAAGCCAG AAAAAACAAG GACTTTGCCT TGAGTGACCG TATTCGGGAC
AGGCTGCTCG AAGCCGGGGT TGAGGTAAAG GATACCAGAG AGGGTGTGAG CTGGTCGCTT
AAAACCGAAA CCTGA
 
Protein sequence
MALQIYNSLS RSKETFEPVH PGVVGMYVCG PTVYGHAHLG HAKSYVSFDV VARWLRQSGY 
RVRYVQNITD VGHLSDDADE GEDKIARQAR LEKTDPMEIA QFYTRSFYDD MDRLGVERPN
IAPTATGHVP EQIALIRQLV GSSHAYVVNG NVYFSVQSFP DYGKLSGRTD QEALQSGTRI
EVRNEKRHPS DFALWKKAEE GHIMKWESPW GTGYPGWHVE CSAMSMKYLG ETVDIHGGGM
ENKFPHHDCE IAQSEAATGR PYVRYWMHNN MVTVGGIKMG KSLKNSVNLK DLFRETDPMV
IRFFILQSHY RSPLDYSEAA IRASSAGLEK LQDTRQRLQK TRPGTGNFDS TAFTERFTAA
MDDDFNTPLA ISILFDFSKS VNSALDKQEG LSADSIAEAA AFLDTFAGKV LGIVSASDEA
SGHASENSRQ TLEKTISILL DMRIEARKNK DFALSDRIRD RLLEAGVEVK DTREGVSWSL
KTET