Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2080 |
Symbol | |
ID | 6355058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2295055 |
End bp | 2295774 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669676 |
Product | protein of unknown function DUF541 |
Protein accession | YP_001944088 |
Protein GI | 189347559 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0404396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA AACGCACTGC CGAAGCTTTT ATTCTTGGCG CTTTTCTCTG TGCTGGTCTT GTCATCGCGG GTTATTTCGT TTCTTCGGGC ATAACAAAAC TCAAGTCTCT TGAACGGGCT GTTTCAGTAA AAGGACTTTC TGAAAAGGAC GTGCCGGCCG ATATAGCCAT CTGGCCGATT AAATTCGAGG TGGCAGCCGA CGATCTTGGC GCGCTGATGG CTGCTATCGA GGAAAAAAAC AGGGTGGTAT ATGATTTTCT GCTTTCCAGC GGATTCGATG CAAAGGAGAT TTCCATATCG GCTCCGGCTG TTATCGATCG CCAGGCACAA GGCTATGGCG ATGCAAACCG ATTTGCTTTC AGGTATGCCG GTAATTCCAC AATCAGTGTG TATACCCGCA ATGTCAATCT CGTTCGCACA TCGGTTCGAA AACTCGTCGA TCTCGGAAAA CTTGGCGTTG CGGTTTCCGG AGAGAACTAT GATGCCAAAA CTGAGTTTCT CTACTCCGGA CTTAACCGCC TGAAACCGGC GATGATCGAG GAGGCTACCA ATAACGCGCG CGCTGTCGCC GAAAAATTTG CCAGTGATTC CAAAAGCAGA CTGGGAAAAA TCAAAAGTGC AACTCAGGGG CAGTTCACCA TCGAGAACCG TGACAGCAAT ACTCCTCATA TCAAGAAAGT CAGGGTGGTT TCGACACTGG AGTACTATCT GACAGACTGA
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Protein sequence | MNNKRTAEAF ILGAFLCAGL VIAGYFVSSG ITKLKSLERA VSVKGLSEKD VPADIAIWPI KFEVAADDLG ALMAAIEEKN RVVYDFLLSS GFDAKEISIS APAVIDRQAQ GYGDANRFAF RYAGNSTISV YTRNVNLVRT SVRKLVDLGK LGVAVSGENY DAKTEFLYSG LNRLKPAMIE EATNNARAVA EKFASDSKSR LGKIKSATQG QFTIENRDSN TPHIKKVRVV STLEYYLTD
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