Gene Clim_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2019 
Symbol 
ID6355523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2238591 
End bp2239259 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID642669617 
Productprotein of unknown function UPF0153 
Protein accessionYP_001944030 
Protein GI189347501 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.290422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGT CCGCAATGGC CATACCGGTA ACCCGTACAG GGCTCGATCG CAGCGCGCCT 
TTCGGTTTTA CCTGCAAACG CTGCCTGCAG TGCTGCAGAA ACAAGAAGAT ACAGGTAAAC 
CCGTATGAGA TTGCCCGACT CGCGCACCAT CTCGGCATAT CGACAACGGA GTTCATCGAA 
CGCTGCACCG TTGAAAACGG CTCATTCCTG AAGTTCAACG ATGACGGGTC ATGCCTGTTT 
CTGGGCGCCG ACGGGTGCGC GGTGCACTCC GACCGTCCGC TGGTCTGCCG CCTCTACCCT 
CTTGCCCGGC ACGTCAACCA GAAAAACGAG GAATGGTTCT CTGAACTGGA ACCCGAAGCT 
GACTGCCGGG GAAGCTATCG AACCGACGAA ACGATTGCCG GGTATCTTGA AGGAGAGGGG 
GCTCCTGCTT TCATGCAGGC AGCGAACATC TATCTGAACC TGCTTTGGGA GATGATGAGC 
GAGCTTGAAA CCCGGCAGGA AGAGGCGTCG GATGAACCCC CGGTCGAAGA AGATATAACT 
CCGGAAAACT GGCTGGATAT GCATGCTGTC GTAACCGGTT ACTGCCTGCG ACACGGACTT 
ACAAAGCCTC ATACCGTCAA TGAAAACATG CGCCTGCACA TCGAGGCGCT GCAACAGTGG 
ATCAGATAA
 
Protein sequence
MTKSAMAIPV TRTGLDRSAP FGFTCKRCLQ CCRNKKIQVN PYEIARLAHH LGISTTEFIE 
RCTVENGSFL KFNDDGSCLF LGADGCAVHS DRPLVCRLYP LARHVNQKNE EWFSELEPEA 
DCRGSYRTDE TIAGYLEGEG APAFMQAANI YLNLLWEMMS ELETRQEEAS DEPPVEEDIT 
PENWLDMHAV VTGYCLRHGL TKPHTVNENM RLHIEALQQW IR