Gene Clim_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2017 
Symbol 
ID6355521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2235950 
End bp2237491 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content54% 
IMG OID642669615 
Producthypothetical protein 
Protein accessionYP_001944028 
Protein GI189347499 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCT CAGCACTCCG GCAGACAGAA CACTCCCATC CGCTCGTTTA CAAGGCATTC 
AGCGTCATTC CTGACGGCGA ACGCCATCTG CAGCGCATCC TCGAATTCGA CCGTTACTGG
GACGCTTCTT CCGAAACGGC GGTTCCCGTT ATCCGGCCTG GTTCGGAACT GCCGGTCAAT
GCGGTTCCGT GCGGGACATT CGACCTGATC TATGCGGGAG GAACCCTGAG TTTTCTGCAT
GCTGCCGTTA TGGCGAAGCG CTATAACCGC AGCGTGCTGG TCTTCGACCG TTATCTTCCG
GCGAAGTCTA CAAGGGACTG GAACATTTCA CGTGAAGAGC TGCTCCGGCT TGCCGATACC
GGCGTGTTCA GCGAAGCGGA GCTTGATTCC GTCATCGTTC GACGTTATAA AACCGGCTGG
GTGGAGTTTT TCAAGCAGGA CGGCAGCCAG AAACGGCTTT ATATGCAGAA TGTGCTCGAT
TGCGCGGTCG ATGCCGACCA TATGCTCGGA CTGGCGAAGG AGAGGGTTCT TTCTGAACCG
CAGAACCGCC TGCTTGACGG GACCACCTTT ACGGCCTGTT ACCGTTTTCC CGATCATATC
GTTGTCGAGG TTGCCGATTG CAAAGGAGAG CTGTTTTACT ACAGGGCGAA GGTTCTGGTG
GATGTGATGG GTATTCTCTC TCCCATCGCC CGACAGCTCA ACCGGGGGAG GCCGCAGACG
CATGTCTGTC CCACTGTGGG TACCATTGCA AGCGGTTTTG AGCATGCCGA TTTCGATACC
GGCGAGATTC TTGCCAGTAC GGCTCCCGCC GAAATCGGTC CGGGCACCGG ACGTCAGCTG
ATATGGGAGG GGTTTCCCGC CGAAGGCAGG AACTACATCA CCTATCTTTT CTTCTATGAC
GAGGTTGATT CGGAAAATGA CAAAACGCTG CTTGGCCTCT TTGAAACCTA TTTCCGCCTG
CTTCCCCAAT ACAAGCAGCC GGGCAGTGAT TTCGTGATTC ACCGTCCGGT TTACGGAATC
ATTCCGGCTT ATTTTCATGA CGGCTTCAGT CTGTCAAGGG TTATTGCCGA TGACCGCATT
GTGCTTTTCG GTGATGCGGC ATCGCTCGGG TCGCCTCTTA CCTTCTGCGG ATTCGGTTCA
ATGGTGCGTA ATCTGCATCG GCTTACCGAA GGACTCGATC GGGCATTGAG GGACGATACC
CTGACAAAAG AGTCTCTTGC TGCCGTCAGC GCCTATGAAC CGAATGTTGC CTCGATGGCG
AATCTGATGA AGTACATGTG TTACAATGCG AAGACCGACG AGCCCAATTT TGTCAACGAC
ATGATGAACG AAGTGATGAT TGTGCTCGAT CAGCTTCCTC CCCGCTATCG TGAAGCCATG
TTTCGTGATG AATTGAAACT CGAAGAGCTG CTGACGGTTA TGCTTAAGGT TGCCTGGCGC
TACCCGAAAA TTCTTTACGC GACATGGGAA AAACTCGGGC TGCCGGGTTC GGTGGGGTTT
CTGAAAAACC TTGCCGGATG GGCTTTCTCA ACCACGAAGT AA
 
Protein sequence
MSFSALRQTE HSHPLVYKAF SVIPDGERHL QRILEFDRYW DASSETAVPV IRPGSELPVN 
AVPCGTFDLI YAGGTLSFLH AAVMAKRYNR SVLVFDRYLP AKSTRDWNIS REELLRLADT
GVFSEAELDS VIVRRYKTGW VEFFKQDGSQ KRLYMQNVLD CAVDADHMLG LAKERVLSEP
QNRLLDGTTF TACYRFPDHI VVEVADCKGE LFYYRAKVLV DVMGILSPIA RQLNRGRPQT
HVCPTVGTIA SGFEHADFDT GEILASTAPA EIGPGTGRQL IWEGFPAEGR NYITYLFFYD
EVDSENDKTL LGLFETYFRL LPQYKQPGSD FVIHRPVYGI IPAYFHDGFS LSRVIADDRI
VLFGDAASLG SPLTFCGFGS MVRNLHRLTE GLDRALRDDT LTKESLAAVS AYEPNVASMA
NLMKYMCYNA KTDEPNFVND MMNEVMIVLD QLPPRYREAM FRDELKLEEL LTVMLKVAWR
YPKILYATWE KLGLPGSVGF LKNLAGWAFS TTK